FASTQC-Report Basic StatisticsFilenameAM-AL-LC2_S109_R1_001.fastq.gzFile typeConventional base callsEncodingSanger / Illumina 1.9Total Sequences45307Sequences flagged as poor quality0Sequence length61%GC59Per base sequence qualityPer tile sequence qualityPer sequence quality scoresPer base sequence contentPer sequence GC contentPer base N contentSequence Length DistributionSequence Duplication LevelsOverrepresented sequencesAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGGGGGGGGGGG2828362.42523230405897TruSeq Adapter, Index 22 (97% over 38bp)TCTCTCTCTTTTCCTCCTCCTCCGTTGTTGTTGTTGAGAGAGATAGATCGGAAGAGCACAC11472.531617630829673No HitAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGGGGGGGGGGT3900.8607941377712054TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATTTGGGGGGGGGGGGGGG3280.7239499415101419TruSeq Adapter, Index 22 (97% over 38bp)GGAGGAAAATCCGTTGGCTTTATAGACCGTGAGGGTTCAAGTCCCTCTATCCCCACCTAGG3080.6798066523936699No HitAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGGGGGGGGGTG1940.42818990442977906TruSeq Adapter, Index 22 (97% over 38bp)CGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGGGGGGGGGGG1620.3575606418434238TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGGGGGGGGTGG1220.2692740636104796TruSeq Adapter, Index 22 (97% over 38bp)TGGTTGAGGAGTTACTCGGAATGCTGCCAAAATATCCGAGATCGGAAGAGCACACGTCTGA1140.2516167479638908Illumina Multiplexing PCR Primer 2.01 (100% over 23bp)GGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGGGGGGGGGGG1130.24940958350806716TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATGTGGGGGGGGGGGGGGG1120.24720241905224358TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCGGGGGGGGGGGGGGGG1040.22954510340565476TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAGCACAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCT990.21850928112653675TruSeq Adapter, Index 22 (97% over 38bp)AAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGGGGGGGGGG830.1831946498333591TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAGCACAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATC820.18098748537753548TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCATCTGGGGGGGGGGGGGGGG720.15891584081929944TruSeq Adapter, Index 22 (97% over 38bp)GATTAACTTATTATACTCCTGAATATCAGACCAAGGATACAGATATCTTGGCAGATCGGAA680.15008718299600504No HitAGATCGGAAGAGCACACGTCTGAACTCAGTCACCATACTCGATCTGGGGGGGGGGGGGGGG610.1346370318052398Illumina Multiplexing PCR Primer 2.01 (96% over 27bp)AGCTCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGGGGGGGGGGG600.13242986734941622TruSeq Adapter, Index 7 (97% over 35bp)AGATCGGAAGAGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGG590.1302227028935926TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGG580.128015538437769TruSeq Adapter, Index 22 (97% over 38bp)AGATCGGAAGAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGG570.1258083739819454TruSeq Adapter, Index 22 (97% over 38bp)CCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTCAACAAGATCGGAAGAG540.11918688061447458No HitAGATCGGAAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCATACTCGATCTGGGGGG480.10594389387953297TruSeq Adapter, Index 22 (97% over 38bp)Adapter Content