FASTQC-Report Basic StatisticsFilenameAM-AL-LC1_S46_R1_001.fastq.gzFile typeConventional base callsEncodingSanger / Illumina 1.9Total Sequences162664Sequences flagged as poor quality0Sequence length61%GC58Per base sequence qualityPer tile sequence qualityPer sequence quality scoresPer base sequence contentPer sequence GC contentPer base N contentSequence Length DistributionSequence Duplication LevelsOverrepresented sequencesAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGGGG8415151.733020213446125TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGGGT59993.6879702945949937TruSeq Adapter, Index 13 (97% over 39bp)TCTCTCTCTTTTCCTCCTCCTCCGTTGTTGTTGTTGAGAGAGATAGATCGGAAGAGCACAC29661.8233905473860228No HitAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGGTG21961.3500221315103527TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGTGG13120.8065705995180248TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGGTT10860.6676338956376334TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATTTGGGGGGGGGGGGGGG10280.6319775734028427TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGTGT5890.3620960999360645TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATGTGGGGGGGGGGGGGGG4610.28340628534894013TruSeq Adapter, Index 13 (97% over 39bp)CGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGGGG4520.27787340776078295TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGTGGG4190.25758618993753996TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATATCTGGGGGGGGGGGGGGGG3870.23791373629075885TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGG3740.22992180199675408TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCT3510.21578222593813012TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCGGGGGGGGGGGGGGGG3240.19918359317365858TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGG3170.1948802439384252TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGG2960.18197019623272512TruSeq Adapter, Index 13 (97% over 39bp)GGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGGGG2930.18012590370333942TruSeq Adapter, Index 13 (97% over 39bp)GGAGTTCCACCTGAAGAAGCAGGGGCCGCGGTAGCTGCCGAATCTTCTACTGGTACATGGA2760.16967491270348695No HitAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGGGGG2510.1543058082919392TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGG2500.1536910441154773TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGAT2350.14446958146854866TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATCTGGGGGGGGGGGGGGGGGG2340.14385481729208674TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGG2250.1383219397039296TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATC2230.13709241135100575TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGG2080.12787094870407711TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGGGGGGTGGGG2010.12356759946884376TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCACACGTCTGAACTCAGTCACAGGCAATGATCTGGGGGGGGGGGGGGGG1930.11864948605714846Illumina Multiplexing PCR Primer 2.01 (96% over 27bp)TTCCGATCTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTGGGGGG1820.11188708011606747TruSeq Adapter, Index 13 (97% over 39bp)AGATCGGAAGAGCAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCAATGATCTG1720.10573943835144838TruSeq Adapter, Index 13 (97% over 39bp)Adapter Content