FASTQC-Report Basic StatisticsFilenameAM-AL-EC4_S108_R1_001.fastq.gzFile typeConventional base callsEncodingSanger / Illumina 1.9Total Sequences93877Sequences flagged as poor quality0Sequence length61%GC57Per base sequence qualityPer tile sequence qualityPer sequence quality scoresPer base sequence contentPer sequence GC contentPer base N contentSequence Length DistributionSequence Duplication LevelsOverrepresented sequencesAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCTGGGGGGGGGGGGGGG4995453.212181897589396TruSeq Adapter, Index 1 (97% over 36bp)TCTCTCTCTTTTCCTCCTCCTCCGTTGTTGTTGTTGAGAGAGATAGATCGGAAGAGCACAC11021.1738764553618033No HitAAATTCTGTGACATATCAGGGCGGCCAATTAGTAAATTGTCTTGGACCAGTCTAACAGATG9220.9821361994950839No HitAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCACCTACGATCTGGGGGGGGGGGGGGG8440.8990487552861723TruSeq Adapter, Index 7 (97% over 35bp)AAATTTGATCTCCTTCCATACTTCACAAGCAGCAGCTAGTTCAGGACTCCATTTACAAGCT7580.8074395219276286No HitAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATTTGGGGGGGGGGGGGGG7230.7701566943979888TruSeq Adapter, Index 1 (97% over 36bp)TCACGAGCAAGATCACGTCCTTCATTACGAGCTTGTACACAAGCTTCTAGAGCAACCCGAT7040.7499174451676129No HitCCTTCCTATCTTAGGAGAAGAAACATTGTCTTCATGAACCGGATTTGGCTCAGGATTACCC4890.5208943617712539No HitTGAAGACAATGTTTCTTCTCCTAAGATAGGAAGGGGATAGGTGCAGAGACTCAATGGAAGC4750.5059812307593979No HitTGTAATGTATCTATTTCCTATTAGTTCTCGGATAGAAAAAGAAAAATGATTCTGAATCGAG3240.3451324605600946No HitTGCTACTCTAGTTAACTTAACACAACAGTCTTACACGCATTTGGTCTCGTAGTCTATCAGA3220.3430020132726866No HitAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCTGGGGGGGGGGGGGGT3170.3376758950541666TruSeq Adapter, Index 1 (97% over 36bp)CGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCTGGGGGGGGGGGGGGG2920.31104530396156677TruSeq Adapter, Index 1 (97% over 36bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATGTGGGGGGGGGGGGGGG2850.3035887384556388TruSeq Adapter, Index 1 (97% over 36bp)TAGGGCCTTGAATCCAAATACATTACCTACAATGGAAGTGAACAAGTTAGTAACAGATCGG2850.3035887384556388No HitCTTACTAGTCTCGATCGTTACAAGGGGCGATGCTATGACATCGAGCCCGTTCCTGGAGAGA2440.25991456906377497No HitATTCAACAGGAACAGGAAGAATCTCGTATTTACTCTTGGGACGACAATAATTGATCTTTGT2270.241805767120807No HitAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCGGGGGGGGGGGGGGGG2220.23647964890228707TruSeq Adapter, Index 1 (97% over 36bp)GGTTTATCGATTACAGAACAGGCTCCTCTAGAGGGATATGAAGCACCGCCAGGTCCTTTGA2210.23541442525858305No HitGGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCTGGGGGGGGGGGGGGG1950.20771861052227913TruSeq Adapter, Index 1 (97% over 36bp)TCGACCCCGCCGGAGGAGGAGACCCCATAGATCGGAAGAGCACACGTCTGAACTCCAGTCA1670.17789234849856728Illumina Multiplexing PCR Primer 2.01 (100% over 33bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTAACAACCTACGATCTGGGGGGGGGGGGGGG1670.17789234849856728Illumina Multiplexing PCR Primer 2.01 (97% over 34bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCTGGGGGGGGGGGGGTG1620.1725662302800473TruSeq Adapter, Index 1 (97% over 36bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGACCTACGATCTGGGGGGGGGGGGGGG1560.16617488841782332TruSeq Adapter, Index 9 (97% over 37bp)AAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCTGGGGGGGGGGGGGG1450.15445742833707937TruSeq Adapter, Index 1 (97% over 36bp)CCATATGTTTACCGTAGGAATAGATGTAGACACACGAGCGTACTTTACGTCCGCCACTATA1420.1512617574059674No HitGGCTATGTGGCTGATTGAAGAGTATGCAATGAGCGATTTTAGGTCTGTTTGTCGTAAGATC1400.1491313101185594No HitAGATCGGAAGAGCACACGTCTGAACTCCAATCACAACCTACGATCTGGGGGGGGGGGGGGG1370.1459356391874474Illumina Multiplexing PCR Primer 2.01 (97% over 34bp)AGATCGGAAGAGCACAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCT1350.1438051919000394TruSeq Adapter, Index 1 (97% over 36bp)GATTTATCTGGGGAATATCTGAATGCCAAATTCGTTCTCTCTGAGATCGGAAGAGCACACG1320.14060952096892743No HitAAGATGCCGTCTGTCCGTACCAGGACGAGAAGACCCCATGGAGCTTTACTACAAGATCGGA1290.13741385003781545No HitAGATCGGAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCTGGGGGGG1270.13528340275040746TruSeq Adapter, Index 1 (97% over 36bp)GTTACATCCTTCCCATAAGCCATCGAGCCCATACCCCGAAAATGCTGGTTACATCCTTCCC1240.13208773181929548No HitAGATCGGAAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTACGATCTGGGGG1220.12995728453188748TruSeq Adapter, Index 1 (97% over 36bp)AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAACCTAAGATCTGGGGGGGGGGGGGGG1090.11610937716373554TruSeq Adapter, Index 1 (97% over 36bp)TAATGACCAACATCCGAAAATCACACCCACTAATAAAAATTATCAACAACGCATTCATTGA1080.11504415352003154No HitAdapter Content