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"GAGTA":24911, "GAGTT":44959, "GAGTC":28950, "GAGTG":27490, "GAGCA":511673, "GAGCT":43108, "GAGCC":54009, "GAGCG":47875, "GAGGA":109173, "GAGGT":52076, "GAGGC":67578, "GAGGG":52873, "GTAAA":25938, "GTAAT":23811, "GTAAC":20301, "GTAAG":24019, "GTATA":17243, "GTATT":31044, "GTATC":31214, "GTATG":25282, "GTACA":21721, "GTACT":21339, "GTACC":24999, "GTACG":18962, "GTAGA":77974, "GTAGT":24551, "GTAGC":28083, "GTAGG":28840, "GTTAA":19021, "GTTAT":29406, "GTTAC":23228, "GTTAG":29191, "GTTTA":27462, "GTTTT":65756, "GTTTC":67722, "GTTTG":62205, "GTTCA":52404, "GTTCT":64614, "GTTCC":76964, "GTTCG":49820, "GTTGA":58203, "GTTGT":57275, "GTTGC":57018, "GTTGG":80099, "GTCAA":48358, "GTCAT":42140, "GTCAC":104446, "GTCAG":46023, "GTCTA":25515, "GTCTT":59430, "GTCTC":53337, "GTCTG":316829, "GTCCA":50596, "GTCCT":52305, "GTCCC":43188, "GTCCG":34598, "GTCGA":48234, "GTCGT":44168, "GTCGC":48458, "GTCGG":52483, "GTGAA":47157, "GTGAT":58868, "GTGAC":31046, "GTGAG":39875, "GTGTA":18503, "GTGTT":40958, "GTGTC":28721, "GTGTG":32871, "GTGCA":32078, "GTGCT":43515, "GTGCC":43962, "GTGCG":34266, "GTGGA":59783, "GTGGT":71727, "GTGGC":58971, "GTGGG":65478, "GCAAA":58695, "GCAAT":44654, "GCAAC":55298, "GCAAG":66611, "GCATA":30199, "GCATT":40580, "GCATC":54353, "GCATG":36132, "GCACA":440632, "GCACT":26629, "GCACC":64503, "GCACG":33417, "GCAGA":116510, "GCAGT":34943, "GCAGC":65934, "GCAGG":94344, "GCTAA":20764, "GCTAT":30969, "GCTAC":31056, "GCTAG":32337, "GCTTA":27467, "GCTTT":61192, "GCTTC":88494, "GCTTG":63006, "GCTCA":49026, "GCTCT":47005, "GCTCC":79680, "GCTCG":52495, "GCTGA":59645, "GCTGT":45380, "GCTGC":70751, "GCTGG":104929, "GCCAA":76593, "GCCAT":60022, "GCCAC":63624, "GCCAG":95167, "GCCTA":32248, "GCCTT":67767, "GCCTC":74984, "GCCTG":76726, "GCCCA":76122, "GCCCT":55743, "GCCCC":72482, "GCCCG":62994, "GCCGA":78222, "GCCGT":57694, "GCCGC":94990, "GCCGG":87851, "GCGAA":53928, "GCGAT":52992, "GCGAC":50120, "GCGAG":58394, "GCGTA":21239, "GCGTT":38362, "GCGTC":40090, "GCGTG":34163, "GCGCA":46933, "GCGCT":45662, "GCGCC":69779, "GCGCG":51382, "GCGGA":67529, "GCGGT":58540, "GCGGC":89560, "GCGGG":73271, "GGAAA":80225, "GGAAT":56293, "GGAAC":67901, "GGAAG":625778, "GGATA":51868, "GGATT":62539, "GGATC":54132, "GGATG":72566, "GGACA":48993, "GGACT":35797, "GGACC":41972, "GGACG":48379, "GGAGA":155366, "GGAGT":39364, "GGAGC":70999, "GGAGG":107885, "GGTAA":29095, "GGTAT":33237, "GGTAC":24814, "GGTAG":52132, "GGTTA":30677, "GGTTT":75089, "GGTTC":66593, "GGTTG":88453, "GGTCA":51474, "GGTCT":58013, "GGTCC":41351, "GGTCG":56802, "GGTGA":66737, "GGTGT":48289, "GGTGC":56557, "GGTGG":103715, "GGCAA":71414, "GGCAT":53245, "GGCAC":43455, "GGCAG":91459, "GGCTA":37254, "GGCTT":70146, "GGCTC":55444, "GGCTG":83979, "GGCCA":70763, "GGCCT":58673, "GGCCC":53212, "GGCCG":74627, "GGCGA":86870, "GGCGT":48136, "GGCGC":67548, "GGCGG":113474, "GGGAA":64131, "GGGAT":58373, "GGGAC":40348, "GGGAG":85643, "GGGTA":31515, "GGGTT":69533, "GGGTC":47266, "GGGTG":63010, "GGGCA":62987, "GGGCT":56433, "GGGCC":49672, "GGGCG":67979, "GGGGA":69149, "GGGGT":62093, "GGGGC":61844, "GGGGG":137226 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 1142288, "total_bases": 69679568, "q20_bases": 67600680, "q30_bases": 64610367, "total_cycles": 61, "quality_curves": { "A":[39.4098,39.2854,39.2017,39.1236,39.005,39.097,39.1474,38.9981,39.1672,39.1618,39.1913,39.2005,39.217,39.2097,39.1804,39.1699,39.1984,39.194,39.2069,39.1643,38.6602,39.1409,39.1698,39.1884,38.6943,39.1323,39.1868,38.6502,39.0795,38.7978,39.1543,39.1644,39.0824,38.8441,39.1007,39.068,39.0378,39.0321,38.7016,38.4641,38.7969,38.1807,38.613,38.4851,38.2688,37.9903,37.5521,37.2395,37.4717,37.1168,36.8255,36.5454,36.312,35.8448,35.6392,35.2487,34.9647,34.6625,34.3873,33.7737,33.6349], 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"CCTGC":101184, "CCTGG":72244, "CCCAA":78057, "CCCAT":54595, "CCCAC":77447, "CCCAG":72997, "CCCTA":25694, "CCCTT":53165, "CCCTC":61498, "CCCTG":60631, "CCCCA":86672, "CCCCT":58334, "CCCCC":65091, "CCCCG":63575, "CCCGA":53178, "CCCGT":38791, "CCCGC":75665, "CCCGG":59249, "CCGAA":54083, "CCGAT":49414, "CCGAC":50713, "CCGAG":48800, "CCGTA":24819, "CCGTT":43051, "CCGTC":52843, "CCGTG":36733, "CCGCA":55581, "CCGCT":57621, "CCGCC":112783, "CCGCG":52184, "CCGGA":56225, "CCGGT":53390, "CCGGC":82129, "CCGGG":56351, "CGAAA":48518, "CGAAT":34677, "CGAAC":44420, "CGAAG":56194, "CGATA":33015, "CGATT":42812, "CGATC":50756, "CGATG":58262, "CGACA":41542, "CGACT":33349, "CGACC":56770, "CGACG":49625, "CGAGA":49035, "CGAGT":27063, "CGAGC":45404, "CGAGG":55943, "CGTAA":18163, "CGTAT":20001, "CGTAC":17206, "CGTAG":22970, "CGTTA":15647, "CGTTT":37554, "CGTTC":45629, "CGTTG":42296, "CGTCA":39223, "CGTCT":41022, "CGTCC":46756, "CGTCG":49207, "CGTGA":31371, "CGTGT":21135, "CGTGC":28885, "CGTGG":43944, "CGCAA":40290, "CGCAT":30217, "CGCAC":34431, "CGCAG":44382, "CGCTA":19124, "CGCTT":47297, "CGCTC":48466, "CGCTG":51791, "CGCCA":69023, "CGCCT":71336, "CGCCC":69897, "CGCCG":88667, "CGCGA":39149, "CGCGT":25877, "CGCGC":47352, "CGCGG":49863, "CGGAA":50417, "CGGAT":45231, "CGGAC":31374, "CGGAG":56074, "CGGTA":27313, "CGGTT":49695, "CGGTC":47551, "CGGTG":55083, "CGGCA":60875, "CGGCT":62427, "CGGCC":68911, "CGGCG":86100, "CGGGA":53687, "CGGGT":43149, "CGGGC":52903, "CGGGG":55529, "GAAAA":78040, "GAAAT":56158, "GAAAC":57537, "GAAAG":60825, "GAATA":36292, "GAATT":43511, "GAATC":47211, "GAATG":42566, "GAACA":53241, "GAACT":50497, "GAACC":59532, "GAACG":41459, "GAAGA":92302, "GAAGT":44418, "GAAGC":69151, "GAAGG":72534, "GATAA":41597, "GATAT":39713, "GATAC":30778, "GATAG":35224, "GATTA":28928, "GATTT":56817, "GATTC":51546, "GATTG":54029, "GATCA":51676, "GATCT":51007, "GATCC":51577, "GATCG":47393, "GATGA":75088, "GATGT":42685, "GATGC":50024, "GATGG":69597, "GACAA":50942, "GACAT":36009, "GACAC":28818, "GACAG":34451, "GACTA":20174, "GACTT":40116, "GACTC":27936, "GACTG":32926, "GACCA":56235, "GACCT":44425, "GACCC":49036, "GACCG":46845, "GACGA":59231, "GACGT":25589, "GACGC":37023, "GACGG":47378, "GAGAA":79294, "GAGAT":56779, "GAGAC":47712, "GAGAG":44689, "GAGTA":20410, "GAGTT":40196, "GAGTC":26162, "GAGTG":24409, "GAGCA":56168, "GAGCT":38486, "GAGCC":47779, "GAGCG":41936, "GAGGA":93882, "GAGGT":46468, "GAGGC":60230, "GAGGG":47099, "GTAAA":22687, "GTAAT":21810, "GTAAC":18127, "GTAAG":16980, "GTATA":14458, "GTATT":28490, "GTATC":28197, "GTATG":22943, "GTACA":18254, "GTACT":19270, "GTACC":22504, "GTACG":16999, "GTAGA":28022, "GTAGT":22469, "GTAGC":25584, "GTAGG":26056, "GTTAA":16414, "GTTAT":27266, "GTTAC":21133, "GTTAG":15434, "GTTTA":22172, "GTTTT":60099, "GTTTC":61181, "GTTTG":56946, "GTTCA":45355, "GTTCT":59287, "GTTCC":69906, "GTTCG":45032, "GTTGA":50962, "GTTGT":52575, "GTTGC":51986, "GTTGG":73297, "GTCAA":41177, "GTCAT":38140, "GTCAC":28782, "GTCAG":31868, "GTCTA":19179, "GTCTT":53797, "GTCTC":49597, "GTCTG":39745, "GTCCA":43195, "GTCCT":47589, "GTCCC":39518, "GTCCG":30912, "GTCGA":40024, "GTCGT":39201, "GTCGC":43005, "GTCGG":46266, "GTGAA":39554, "GTGAT":41855, "GTGAC":27675, "GTGAG":29423, "GTGTA":14703, "GTGTT":37147, "GTGTC":25648, "GTGTG":29522, "GTGCA":26742, "GTGCT":39071, "GTGCC":39395, "GTGCG":30572, "GTGGA":50712, "GTGGT":64435, "GTGGC":52765, "GTGGG":58609, "GCAAA":49465, "GCAAT":40576, "GCAAC":49877, "GCAAG":48775, "GCATA":24305, "GCATT":36721, "GCATC":48672, "GCATG":32500, "GCACA":32213, "GCACT":23715, "GCACC":57073, "GCACG":28814, "GCAGA":53619, "GCAGT":31447, "GCAGC":58744, "GCAGG":83322, "GCTAA":17168, "GCTAT":28109, "GCTAC":27659, "GCTAG":15435, "GCTTA":21268, "GCTTT":56196, "GCTTC":80244, "GCTTG":57517, "GCTCA":41380, "GCTCT":42152, "GCTCC":72555, "GCTCG":46516, "GCTGA":50791, "GCTGT":41294, "GCTGC":63237, "GCTGG":94259, "GCCAA":63726, "GCCAT":54367, "GCCAC":56893, "GCCAG":66109, "GCCTA":24138, "GCCTT":61737, "GCCTC":67883, "GCCTG":68841, "GCCCA":62968, "GCCCT":50099, "GCCCC":65122, "GCCCG":55361, "GCCGA":64944, "GCCGT":51608, "GCCGC":82948, "GCCGG":76988, "GCGAA":44126, "GCGAT":46944, "GCGAC":44393, "GCGAG":42935, "GCGTA":16431, "GCGTT":34267, "GCGTC":35509, "GCGTG":30024, "GCGCA":37805, "GCGCT":40230, "GCGCC":61719, "GCGCG":44623, "GCGGA":54826, "GCGGT":52043, "GCGGC":78480, "GCGGG":64585, "GGAAA":68437, "GGAAT":51191, "GGAAC":61078, "GGAAG":70797, "GGATA":41737, "GGATT":57195, "GGATC":48419, "GGATG":65442, "GGACA":40265, "GGACT":32069, "GGACC":37268, "GGACG":42443, "GGAGA":89863, "GGAGT":35052, "GGAGC":63364, "GGAGG":95101, "GGTAA":24284, "GGTAT":30211, "GGTAC":22461, "GGTAG":32301, "GGTTA":23825, "GGTTT":68650, "GGTTC":60564, "GGTTG":80713, "GGTCA":42808, "GGTCT":52794, "GGTCC":37263, "GGTCG":49859, "GGTGA":56677, "GGTGT":43599, "GGTGC":50532, "GGTGG":92610, "GGCAA":60408, "GGCAT":47957, "GGCAC":38491, "GGCAG":63047, "GGCTA":28972, "GGCTT":63464, "GGCTC":50127, "GGCTG":75458, "GGCCA":57763, "GGCCT":52671, "GGCCC":47399, "GGCCG":65523, "GGCGA":72604, "GGCGT":42625, "GGCGC":58712, "GGCGG":99460, "GGGAA":53989, "GGGAT":52355, "GGGAC":36172, "GGGAG":63965, "GGGTA":24874, "GGGTT":63585, "GGGTC":42680, "GGGTG":56384, "GGGCA":51891, "GGGCT":50992, "GGGCC":44433, "GGGCG":59480, "GGGGA":58022, "GGGGT":55491, "GGGGC":55131, "GGGGG":47773 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/AM-AL-7A_S65_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/AM-AL-7A_S65_R2_001.fastq.gz -o AM-AL-7A.trim.R1.fastq.gz -O AM-AL-7A.trim.R2.fastq.gz -m --merged_out AM-AL-7A.trim.merged.fastq.gz " }