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"GTGTC":33218, "GTGTG":63527, "GTGCA":42374, "GTGCT":51617, "GTGCC":48437, "GTGCG":52203, "GTGGA":70391, "GTGGT":93113, "GTGGC":73902, "GTGGG":78657, "GCAAA":69457, "GCAAT":49777, "GCAAC":60881, "GCAAG":78432, "GCATA":31928, "GCATT":43609, "GCATC":64488, "GCATG":47716, "GCACA":281342, "GCACT":31029, "GCACC":74788, "GCACG":49481, "GCAGA":113689, "GCAGT":42917, "GCAGC":88404, "GCAGG":101368, "GCTAA":24784, "GCTAT":32245, "GCTAC":32559, "GCTAG":26724, "GCTTA":28799, "GCTTT":68845, "GCTTC":88091, "GCTTG":67973, "GCTCA":55637, "GCTCT":51604, "GCTCC":65645, "GCTCG":64525, "GCTGA":77464, "GCTGT":53727, "GCTGC":86278, "GCTGG":116866, "GCCAA":84706, "GCCAT":67211, "GCCAC":77419, "GCCAG":109322, "GCCTA":32831, "GCCTT":73877, "GCCTC":69371, "GCCTG":82295, "GCCCA":83446, "GCCCT":61536, "GCCCC":64859, "GCCCG":75430, "GCCGA":107813, "GCCGT":69150, "GCCGC":124516, "GCCGG":106157, "GCGAA":73001, "GCGAT":68426, "GCGAC":60534, "GCGAG":72982, "GCGTA":28723, "GCGTT":50572, "GCGTC":53808, "GCGTG":58566, "GCGCA":69010, "GCGCT":64632, "GCGCC":94002, "GCGCG":85140, "GCGGA":75611, "GCGGT":74485, "GCGGC":121999, "GCGGG":88280, "GGAAA":103127, "GGAAT":59572, "GGAAC":64870, "GGAAG":454064, "GGATA":50390, "GGATT":64116, "GGATC":58240, "GGATG":80401, "GGACA":54167, "GGACT":36539, "GGACC":44620, "GGACG":59780, "GGAGA":166932, "GGAGT":46902, "GGAGC":71471, "GGAGG":119178, "GGTAA":36104, "GGTAT":34081, "GGTAC":26238, "GGTAG":52285, "GGTTA":32607, "GGTTT":78247, "GGTTC":62729, "GGTTG":96118, "GGTCA":61059, "GGTCT":56373, "GGTCC":41385, "GGTCG":69335, "GGTGA":86106, "GGTGT":64755, "GGTGC":71097, "GGTGG":131810, "GGCAA":85699, "GGCAT":61206, "GGCAC":50666, "GGCAG":97069, "GGCTA":39723, "GGCTT":77318, "GGCTC":57229, "GGCTG":96742, "GGCCA":86861, "GGCCT":66159, "GGCCC":56994, "GGCCG":95999, "GGCGA":112124, "GGCGT":71045, "GGCGC":96175, "GGCGG":141809, "GGGAA":85074, "GGGAT":63496, "GGGAC":43782, "GGGAG":113160, "GGGTA":33760, "GGGTT":73077, "GGGTC":48965, "GGGTG":82170, "GGGCA":71933, "GGGCT":62909, "GGGCC":55813, "GGGCG":91887, "GGGGA":85265, "GGGGT":65755, "GGGGC":64333, "GGGGG":175150 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 1165759, "total_bases": 71111299, "q20_bases": 69372545, "q30_bases": 66037810, "total_cycles": 61, "quality_curves": { "A":[39.4344,39.2476,39.192,38.922,39.0234,39.0917,39.1986,39.1256,39.205,39.1918,39.1647,39.1901,39.2257,39.1956,39.1249,39.117,39.2055,39.1393,39.2263,39.1215,38.4491,39.1068,39.1641,39.112,38.5562,39.0799,39.0651,38.3773,38.9473,38.0605,39.0809,39.155,39.0242,38.979,38.4796,39.05,38.9972,38.4787,38.8877,38.693,38.8446,38.2815,38.8112,38.6705,38.6309,38.7817,38.7045,37.9735,38.5859,37.971,37.8227,37.584,38.2796,38.0822,37.7656,36.6724,36.3547,35.996,35.794,36.0085,35.18], 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"CCTGG":76403, "CCCAA":70740, "CCCAT":50170, "CCCAC":79017, "CCCAG":71602, "CCCTA":24581, "CCCTT":57968, "CCCTC":67502, "CCCTG":59618, "CCCCA":75598, "CCCCT":52986, "CCCCC":59628, "CCCCG":60093, "CCCGA":57850, "CCCGT":38694, "CCCGC":77183, "CCCGG":60563, "CCGAA":62927, "CCGAT":56802, "CCGAC":61855, "CCGAG":57593, "CCGTA":27540, "CCGTT":41901, "CCGTC":55600, "CCGTG":44023, "CCGCA":63046, "CCGCT":58468, "CCGCC":127067, "CCGCG":66289, "CCGGA":57664, "CCGGT":52793, "CCGGC":92031, "CCGGG":60831, "CGAAA":60302, "CGAAT":40100, "CGAAC":52654, "CGAAG":73981, "CGATA":36178, "CGATT":45909, "CGATC":64089, "CGATG":73438, "CGACA":50724, "CGACT":36664, "CGACC":66614, "CGACG":67132, "CGAGA":58640, "CGAGT":32059, "CGAGC":58198, "CGAGG":71328, "CGTAA":22898, "CGTAT":21730, "CGTAC":19921, "CGTAG":26969, "CGTTA":17593, "CGTTT":41871, "CGTTC":45917, "CGTTG":49560, "CGTCA":46459, "CGTCT":41550, "CGTCC":47869, "CGTCG":63632, "CGTGA":39629, "CGTGT":30212, "CGTGC":40167, "CGTGG":55624, "CGCAA":47139, "CGCAT":37786, "CGCAC":51911, "CGCAG":56193, "CGCTA":20734, "CGCTT":49998, "CGCTC":51953, "CGCTG":68725, "CGCCA":89121, "CGCCT":69271, "CGCCC":80142, "CGCCG":119934, "CGCGA":52614, "CGCGT":36135, "CGCGC":72436, "CGCGG":65959, "CGGAA":57855, "CGGAT":46585, "CGGAC":37419, "CGGAG":55271, "CGGTA":30424, "CGGTT":49182, "CGGTC":51010, "CGGTG":69912, "CGGCA":76958, "CGGCT":67298, "CGGCC":82408, "CGGCG":117581, "CGGGA":59211, "CGGGT":48338, "CGGGC":64087, "CGGGG":58745, "GAAAA":102314, "GAAAT":61836, "GAAAC":61807, "GAAAG":79876, "GAATA":37616, "GAATT":46945, "GAATC":49103, "GAATG":45462, "GAACA":59742, "GAACT":48736, "GAACC":57249, "GAACG":49649, "GAAGA":121118, "GAAGT":53390, "GAAGC":81188, "GAAGG":99870, "GATAA":40909, "GATAT":37988, "GATAC":29027, "GATAG":36701, "GATTA":30017, "GATTT":60480, "GATTC":49773, "GATTG":51836, "GATCA":62523, "GATCT":52348, "GATCC":51144, "GATCG":64854, "GATGA":83103, "GATGT":48901, "GATGC":59191, "GATGG":79548, "GACAA":53793, "GACAT":39989, "GACAC":33425, "GACAG":41639, "GACTA":20410, "GACTT":40955, "GACTC":28612, "GACTG":36856, "GACCA":62479, "GACCT":49347, "GACCC":48402, "GACCG":55736, "GACGA":71581, "GACGT":34753, "GACGC":48607, "GACGG":58196, "GAGAA":100227, "GAGAT":63259, "GAGAC":53968, "GAGAG":74400, "GAGTA":23775, "GAGTT":44785, "GAGTC":28018, "GAGTG":31349, "GAGCA":65399, "GAGCT":43951, "GAGCC":52326, "GAGCG":54594, "GAGGA":110393, "GAGGT":55256, "GAGGC":66576, "GAGGG":67719, "GTAAA":26677, "GTAAT":23374, "GTAAC":20468, "GTAAG":19463, "GTATA":14690, "GTATT":29518, "GTATC":27413, "GTATG":23630, "GTACA":20530, "GTACT":19515, "GTACC":23122, "GTACG":20419, "GTAGA":30323, "GTAGT":23565, "GTAGC":28478, "GTAGG":28801, "GTTAA":18493, "GTTAT":25802, "GTTAC":20600, "GTTAG":15867, "GTTTA":23923, "GTTTT":65657, "GTTTC":57427, "GTTTG":57758, "GTTCA":47986, "GTTCT":53438, "GTTCC":53573, "GTTCG":50865, "GTTGA":60450, "GTTGT":55522, "GTTGC":53047, "GTTGG":82596, "GTCAA":44795, "GTCAT":39623, "GTCAC":32462, "GTCAG":39048, "GTCTA":19058, "GTCTT":50676, "GTCTC":47543, "GTCTG":40120, "GTCCA":42717, "GTCCT":44692, "GTCCC":36022, "GTCCG":35991, "GTCGA":57647, "GTCGT":45654, "GTCGC":49009, "GTCGG":57661, "GTGAA":49570, "GTGAT":47872, "GTGAC":33279, "GTGAG":36055, "GTGTA":19135, "GTGTT":45649, "GTGTC":29152, "GTGTG":57245, "GTGCA":34732, "GTGCT":44547, "GTGCC":42293, "GTGCG":45327, "GTGGA":59208, "GTGGT":82333, "GTGGC":64741, "GTGGG":67635, "GCAAA":56779, "GCAAT":42790, "GCAAC":52876, "GCAAG":56686, "GCATA":25424, "GCATT":37485, "GCATC":55450, "GCATG":40952, "GCACA":44159, "GCACT":26708, "GCACC":64697, "GCACG":42382, "GCAGA":64023, "GCAGT":37355, "GCAGC":76991, "GCAGG":87300, "GCTAA":18657, "GCTAT":27226, "GCTAC":27627, "GCTAG":14190, "GCTTA":21905, "GCTTT":59658, "GCTTC":76320, "GCTTG":59021, "GCTCA":45929, "GCTCT":44610, "GCTCC":57607, "GCTCG":55427, "GCTGA":63767, "GCTGT":45899, "GCTGC":74837, "GCTGG":101498, "GCCAA":68673, "GCCAT":58009, "GCCAC":67399, "GCCAG":79727, "GCCTA":25121, "GCCTT":64216, "GCCTC":61009, "GCCTG":70655, "GCCCA":68312, "GCCCT":53618, "GCCCC":56801, "GCCCG":64777, "GCCGA":89524, "GCCGT":59873, "GCCGC":107528, "GCCGG":91314, "GCGAA":59484, "GCGAT":58797, "GCGAC":52396, "GCGAG":56108, "GCGTA":22840, "GCGTT":43221, "GCGTC":45926, "GCGTG":50371, "GCGCA":55967, "GCGCT":55285, "GCGCC":81525, "GCGCG":72301, "GCGGA":63085, "GCGGT":65237, "GCGGC":105889, "GCGGG":75735, "GGAAA":85278, "GGAAT":51823, "GGAAC":56768, "GGAAG":95848, "GGATA":41364, "GGATT":55390, "GGATC":50846, "GGATG":69551, "GGACA":45305, "GGACT":31496, "GGACC":38996, "GGACG":51647, "GGAGA":115369, "GGAGT":40944, "GGAGC":62418, "GGAGG":102683, "GGTAA":28432, "GGTAT":29289, "GGTAC":22427, "GGTAG":34453, "GGTTA":25925, "GGTTT":67468, "GGTTC":54322, "GGTTG":84817, "GGTCA":50127, "GGTCT":49091, "GGTCC":35990, "GGTCG":59933, "GGTGA":70672, "GGTGT":56778, "GGTGC":61661, "GGTGG":114876, "GGCAA":70167, "GGCAT":52608, "GGCAC":43714, "GGCAG":71563, "GGCTA":31462, "GGCTT":67033, "GGCTC":49988, "GGCTG":83921, "GGCCA":70801, "GGCCT":57298, "GGCCC":49546, "GGCCG":82380, "GGCGA":93669, "GGCGT":60923, "GGCGC":81657, "GGCGG":122621, "GGGAA":70286, "GGGAT":54829, "GGGAC":37997, "GGGAG":87795, "GGGTA":26502, "GGGTT":63489, "GGGTC":42586, "GGGTG":69903, "GGGCA":59240, "GGGCT":55143, "GGGCC":48662, "GGGCG":78549, "GGGGA":70361, "GGGGT":56174, "GGGGC":56139, "GGGGG":54989 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/b2/AM-AL-37B_S51_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/b2/AM-AL-37B_S51_R2_001.fastq.gz -o AM-AL-37B.trim.R1.fastq.gz -O AM-AL-37B.trim.R2.fastq.gz -m --merged_out AM-AL-37B.trim.merged.fastq.gz " }