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"GTCAG":81839, "GTCTA":39310, "GTCTT":91671, "GTCTC":82879, "GTCTG":288572, "GTCCA":80010, "GTCCT":80436, "GTCCC":64501, "GTCCG":65820, "GTCGA":107394, "GTCGT":80826, "GTCGC":89339, "GTCGG":102561, "GTGAA":91695, "GTGAT":85147, "GTGAC":59546, "GTGAG":73543, "GTGTA":35935, "GTGTT":78765, "GTGTC":51060, "GTGTG":91963, "GTGCA":65757, "GTGCT":79928, "GTGCC":76511, "GTGCG":78120, "GTGGA":107933, "GTGGT":141817, "GTGGC":113161, "GTGGG":119733, "GCAAA":107749, "GCAAT":77297, "GCAAC":92795, "GCAAG":120367, "GCATA":50131, "GCATT":68566, "GCATC":100359, "GCATG":73434, "GCACA":428089, "GCACT":48315, "GCACC":114659, "GCACG":77729, "GCAGA":174237, "GCAGT":66989, "GCAGC":135453, "GCAGG":154642, "GCTAA":38769, "GCTAT":50115, "GCTAC":50833, "GCTAG":40386, "GCTTA":45044, "GCTTT":107400, "GCTTC":138021, "GCTTG":104928, "GCTCA":87463, "GCTCT":82103, "GCTCC":103197, "GCTCG":101045, "GCTGA":118994, "GCTGT":84578, "GCTGC":134082, "GCTGG":180225, "GCCAA":131756, "GCCAT":105132, "GCCAC":119076, 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"GGCAG":149646, "GGCTA":61521, "GGCTT":120479, "GGCTC":89427, "GGCTG":149561, "GGCCA":135122, "GGCCT":103869, "GGCCC":88852, "GGCCG":149204, "GGCGA":169551, "GGCGT":108110, "GGCGC":147627, "GGCGG":220766, "GGGAA":128761, "GGGAT":96980, "GGGAC":67107, "GGGAG":170255, "GGGTA":51570, "GGGTT":110612, "GGGTC":76884, "GGGTG":124515, "GGGCA":110676, "GGGCT":96766, "GGGCC":87708, "GGGCG":141820, "GGGGA":130145, "GGGGT":101010, "GGGGC":99731, "GGGGG":289029 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 1800986, "total_bases": 109860146, "q20_bases": 107248714, "q30_bases": 102107970, "total_cycles": 61, "quality_curves": { 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"CCTCT":97815, "CCTCC":161972, "CCTCG":105674, "CCTGA":92227, "CCTGT":72157, "CCTGC":132658, "CCTGG":117767, "CCCAA":105971, "CCCAT":78457, "CCCAC":117289, "CCCAG":110021, "CCCTA":37892, "CCCTT":91221, "CCCTC":108013, "CCCTG":93397, "CCCCA":114690, "CCCCT":84256, "CCCCC":92172, "CCCCG":93756, "CCCGA":89708, "CCCGT":60360, "CCCGC":121023, "CCCGG":95986, "CCGAA":96344, "CCGAT":89552, "CCGAC":95043, "CCGAG":87637, "CCGTA":42239, "CCGTT":65612, "CCGTC":86114, "CCGTG":67978, "CCGCA":96980, "CCGCT":91188, "CCGCC":199266, "CCGCG":102466, "CCGGA":89387, "CCGGT":84102, "CCGGC":142675, "CCGGG":94585, "CGAAA":92890, "CGAAT":61558, "CGAAC":79049, "CGAAG":112639, "CGATA":56740, "CGATT":72635, "CGATC":98662, "CGATG":112777, "CGACA":78529, "CGACT":57778, "CGACC":101593, "CGACG":104030, "CGAGA":86730, "CGAGT":48980, "CGAGC":88564, "CGAGG":107437, "CGTAA":34770, "CGTAT":33598, "CGTAC":30860, "CGTAG":41462, "CGTTA":27404, "CGTTT":64891, "CGTTC":72939, "CGTTG":76313, "CGTCA":70951, "CGTCT":64588, "CGTCC":74719, "CGTCG":97799, "CGTGA":60997, "CGTGT":46007, "CGTGC":61913, "CGTGG":84430, "CGCAA":73467, "CGCAT":58007, "CGCAC":79970, "CGCAG":86335, "CGCTA":32411, "CGCTT":78642, "CGCTC":82111, "CGCTG":105795, "CGCCA":137744, "CGCCT":110336, "CGCCC":125706, "CGCCG":186070, "CGCGA":80680, "CGCGT":55134, "CGCGC":111401, "CGCGG":101222, "CGGAA":87394, "CGGAT":72461, "CGGAC":56943, "CGGAG":85176, "CGGTA":47317, "CGGTT":77342, "CGGTC":81141, "CGGTG":107793, "CGGCA":117548, "CGGCT":103945, "CGGCC":126978, "CGGCG":179783, "CGGGA":89275, "CGGGT":74776, "CGGGC":98810, "CGGGG":90355, "GAAAA":155849, "GAAAT":96640, "GAAAC":93408, "GAAAG":120132, "GAATA":58858, "GAATT":72699, "GAATC":75855, "GAATG":68918, "GAACA":89479, "GAACT":74656, "GAACC":86912, "GAACG":74068, "GAAGA":181433, "GAAGT":80900, "GAAGC":123582, "GAAGG":148205, "GATAA":63000, "GATAT":59337, "GATAC":45403, "GATAG":56422, "GATTA":46148, "GATTT":95681, "GATTC":77318, "GATTG":79093, "GATCA":95008, "GATCT":80878, "GATCC":79541, "GATCG":97583, "GATGA":125897, "GATGT":74483, "GATGC":91296, "GATGG":120716, "GACAA":82381, "GACAT":61837, "GACAC":50355, "GACAG":63028, "GACTA":31496, "GACTT":64473, "GACTC":44849, "GACTG":55673, "GACCA":93296, "GACCT":77485, "GACCC":73367, "GACCG":86339, "GACGA":108220, "GACGT":53380, "GACGC":75705, "GACGG":88715, "GAGAA":149294, "GAGAT":95204, "GAGAC":81253, "GAGAG":112818, "GAGTA":36302, "GAGTT":69916, "GAGTC":43063, "GAGTG":46879, "GAGCA":98051, "GAGCT":68207, "GAGCC":80955, "GAGCG":81828, "GAGGA":166887, "GAGGT":84561, "GAGGC":101888, "GAGGG":102814, "GTAAA":41856, "GTAAT":36326, "GTAAC":31184, "GTAAG":29929, "GTATA":23223, "GTATT":45509, "GTATC":42432, "GTATG":36256, "GTACA":31407, "GTACT":30169, "GTACC":35207, "GTACG":31845, "GTAGA":46731, "GTAGT":36307, "GTAGC":43529, "GTAGG":43691, "GTTAA":29549, "GTTAT":40414, "GTTAC":32699, "GTTAG":24992, "GTTTA":37079, "GTTTT":102742, "GTTTC":90470, "GTTTG":87071, "GTTCA":74927, "GTTCT":83269, "GTTCC":85059, "GTTCG":78041, "GTTGA":91303, "GTTGT":83784, "GTTGC":81478, "GTTGG":124735, "GTCAA":69770, "GTCAT":61493, "GTCAC":50588, "GTCAG":60555, "GTCTA":29830, "GTCTT":79218, "GTCTC":74117, "GTCTG":62908, "GTCCA":66637, "GTCCT":69495, "GTCCC":56985, "GTCCG":56689, "GTCGA":88402, "GTCGT":68834, "GTCGC":76858, "GTCGG":88236, "GTGAA":74417, "GTGAT":73029, "GTGAC":50987, "GTGAG":55599, "GTGTA":28808, "GTGTT":68592, "GTGTC":44062, "GTGTG":82556, "GTGCA":53882, "GTGCT":69128, "GTGCC":66093, "GTGCG":67722, "GTGGA":90104, "GTGGT":124844, "GTGGC":98729, "GTGGG":102405, "GCAAA":87528, "GCAAT":66051, "GCAAC":79819, "GCAAG":86807, "GCATA":39925, "GCATT":58481, "GCATC":85805, "GCATG":62221, "GCACA":66843, "GCACT":41115, "GCACC":98600, "GCACG":65963, "GCAGA":98137, "GCAGT":57358, "GCAGC":117091, "GCAGG":131877, "GCTAA":29320, "GCTAT":42324, "GCTAC":43003, "GCTAG":21817, "GCTTA":34191, "GCTTT":92762, "GCTTC":119610, "GCTTG":90840, "GCTCA":72347, "GCTCT":70794, "GCTCC":90473, "GCTCG":86760, "GCTGA":97591, "GCTGT":72127, "GCTGC":115984, "GCTGG":155362, "GCCAA":106383, "GCCAT":90272, "GCCAC":102808, "GCCAG":123139, "GCCTA":39630, "GCCTT":100660, "GCCTC":96740, "GCCTG":110163, "GCCCA":105869, "GCCCT":84162, "GCCCC":88833, "GCCCG":101750, "GCCGA":136979, "GCCGT":92146, "GCCGC":167073, "GCCGG":140974, "GCGAA":88874, "GCGAT":89681, "GCGAC":79955, "GCGAG":83577, "GCGTA":35118, "GCGTT":66792, "GCGTC":70068, "GCGTG":75584, "GCGCA":85837, "GCGCT":84896, "GCGCC":124866, "GCGCG":109779, "GCGGA":95947, "GCGGT":101424, "GCGGC":162405, "GCGGG":115103, "GGAAA":128611, "GGAAT":79790, "GGAAC":84646, "GGAAG":142461, "GGATA":62935, "GGATT":85089, "GGATC":77581, "GGATG":105872, "GGACA":68300, "GGACT":48510, "GGACC":60046, "GGACG":77008, "GGAGA":172475, "GGAGT":61643, "GGAGC":93369, "GGAGG":157146, "GGTAA":43921, "GGTAT":45006, "GGTAC":34998, "GGTAG":52169, "GGTTA":40712, "GGTTT":103738, "GGTTC":84560, "GGTTG":127626, "GGTCA":78066, "GGTCT":77188, "GGTCC":56856, "GGTCG":91983, "GGTGA":106826, "GGTGT":84731, "GGTGC":94313, "GGTGG":176345, "GGCAA":106170, "GGCAT":81876, "GGCAC":66795, "GGCAG":109119, "GGCTA":48699, "GGCTT":103265, "GGCTC":77428, "GGCTG":129304, "GGCCA":109731, "GGCCT":89666, "GGCCC":76539, "GGCCG":126277, "GGCGA":140006, "GGCGT":92646, "GGCGC":123913, "GGCGG":190467, "GGGAA":105494, "GGGAT":83158, "GGGAC":57465, "GGGAG":131064, "GGGTA":40261, "GGGTT":95610, "GGGTC":66676, "GGGTG":106065, "GGGCA":90397, "GGGCT":83691, "GGGCC":76018, "GGGCG":120044, "GGGGA":106026, "GGGGT":85200, "GGGGC":86667, "GGGGG":84565 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/b2/AM-AL-37A_S50_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/b2/AM-AL-37A_S50_R2_001.fastq.gz -o AM-AL-37A.trim.R1.fastq.gz -O AM-AL-37A.trim.R2.fastq.gz -m --merged_out AM-AL-37A.trim.merged.fastq.gz " }