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"CTCCC":106409, "CTCCG":94467, "CTCGA":89051, "CTCGT":66766, "CTCGC":83003, "CTCGG":91439, "CTGAA":183273, "CTGAT":74345, "CTGAC":60983, "CTGAG":72499, "CTGTA":34484, "CTGTT":88877, "CTGTC":58855, "CTGTG":60731, "CTGCA":90107, "CTGCT":154754, "CTGCC":129970, "CTGCG":92679, "CTGGA":121597, "CTGGT":113378, "CTGGC":132014, "CTGGG":129798, "CCAAA":107951, "CCAAT":75738, "CCAAC":123382, "CCAAG":114410, "CCATA":50130, "CCATT":67912, "CCATC":113416, "CCATG":84641, "CCACA":102274, "CCACT":58074, "CCACC":188850, "CCACG":92944, "CCAGA":147207, "CCAGT":126920, "CCAGC":181415, "CCAGG":140021, "CCTAA":32368, "CCTAT":37535, "CCTAC":50466, "CCTAG":35769, "CCTTA":35901, "CCTTT":87757, "CCTTC":139440, "CCTTG":115085, "CCTCA":89054, "CCTCT":81840, "CCTCC":180853, "CCTCG":111336, "CCTGA":94676, "CCTGT":89902, "CCTGC":178501, "CCTGG":138460, "CCCAA":117179, "CCCAT":80166, "CCCAC":120616, "CCCAG":143440, "CCCTA":42839, "CCCTT":78018, "CCCTC":103018, "CCCTG":107800, "CCCCA":131439, "CCCCT":90546, 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"GACGA":104545, "GACGT":50979, "GACGC":72185, "GACGG":84776, "GAGAA":116310, "GAGAT":177405, "GAGAC":70391, "GAGAG":75254, "GAGTA":32501, "GAGTT":59733, "GAGTC":40534, "GAGTG":40575, "GAGCA":349754, "GAGCT":67207, "GAGCC":86914, "GAGCG":76871, "GAGGA":156776, "GAGGT":85842, "GAGGC":108001, "GAGGG":91689, "GTAAA":35471, "GTAAT":32808, "GTAAC":34303, "GTAAG":32543, "GTATA":19868, "GTATT":37422, "GTATC":38510, "GTATG":32575, "GTACA":33333, "GTACT":30540, "GTACC":40840, "GTACG":34698, "GTAGA":75798, "GTAGT":34444, "GTAGC":47852, "GTAGG":44356, "GTTAA":23616, "GTTAT":34760, "GTTAC":40091, "GTTAG":29339, "GTTTA":33571, "GTTTT":82816, "GTTTC":79202, "GTTTG":80226, "GTTCA":74444, "GTTCT":77435, "GTTCC":102433, "GTTCG":79513, "GTTGA":84147, "GTTGT":73846, "GTTGC":78851, "GTTGG":107001, "GTCAA":66375, "GTCAT":57640, "GTCAC":79451, "GTCAG":66087, "GTCTA":30071, "GTCTT":70206, "GTCTC":65988, "GTCTG":185671, "GTCCA":73663, "GTCCT":75830, "GTCCC":66413, "GTCCG":58947, "GTCGA":88917, "GTCGT":73027, "GTCGC":80494, "GTCGG":88972, "GTGAA":76130, "GTGAT":72646, "GTGAC":50313, "GTGAG":57027, "GTGTA":25718, "GTGTT":55346, "GTGTC":42329, "GTGTG":47413, "GTGCA":53238, "GTGCT":69702, "GTGCC":74202, "GTGCG":62559, "GTGGA":87184, "GTGGT":101496, "GTGGC":99185, "GTGGG":101123, "GCAAA":77130, "GCAAT":59350, "GCAAC":78569, "GCAAG":94016, "GCATA":38111, "GCATT":56202, "GCATC":82504, "GCATG":62103, "GCACA":270234, "GCACT":40073, "GCACC":114903, "GCACG":65709, "GCAGA":130388, "GCAGT":54638, "GCAGC":132129, "GCAGG":168690, "GCTAA":29119, "GCTAT":42801, "GCTAC":66135, "GCTAG":31873, "GCTTA":34267, "GCTTT":81181, "GCTTC":124592, "GCTTG":89057, "GCTCA":77757, "GCTCT":65148, "GCTCC":102069, "GCTCG":91752, "GCTGA":98024, "GCTGT":76455, "GCTGC":134952, "GCTGG":170465, "GCCAA":116921, "GCCAT":89517, "GCCAC":106828, "GCCAG":147470, "GCCTA":44221, "GCCTT":96785, "GCCTC":109552, "GCCTG":137146, "GCCCA":122274, "GCCCT":93451, "GCCCC":106919, "GCCCG":114514, "GCCGA":144716, "GCCGT":101822, "GCCGC":179912, 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"GC":[0.629473,0.58482,0.608063,0.600886,0.596277,0.545824,0.554294,0.545314,0.534176,0.550158,0.5551,0.548804,0.559961,0.561728,0.555619,0.56518,0.564181,0.556816,0.562419,0.560486,0.555993,0.565296,0.565146,0.559029,0.564806,0.564058,0.555439,0.563478,0.561329,0.554951,0.562977,0.562438,0.55487,0.561868,0.561065,0.556477,0.561195,0.560842,0.555102,0.56207,0.559971,0.554757,0.56003,0.560012,0.555599,0.561987,0.559848,0.555196,0.558667,0.560008,0.55497,0.560561,0.560956,0.553097,0.559535,0.558428,0.55584,0.558894,0.560015,0.552334,0.561929,0.561506,0.555112,0.561626,0.561437,0.5579,0.559834,0.56151,0.55863,0.560199,0.563788,0.555389,0.563716,0.564807,0.55932,0.563482,0.564491,0.560725,0.567152,0.567756,0.56676,0.572177,0.570354,0.572477,0.58171,0.589684,0.591289,0.588987,0.577696,0.547925,0.524992] }, "kmer_count": { "AAAAA":98062, "AAAAT":62650, "AAAAC":73723, "AAAAG":79272, "AAATA":43944, "AAATT":45778, "AAATC":63739, "AAATG":50346, "AAACA":59752, "AAACT":44078, "AAACC":88230, 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"CTTGT":66995, "CTTGC":70274, "CTTGG":78542, "CTCAA":61089, "CTCAT":50563, "CTCAC":46635, "CTCAG":53757, "CTCTA":31578, "CTCTT":70176, "CTCTC":58355, "CTCTG":56459, "CTCCA":95222, "CTCCT":143002, "CTCCC":93903, "CTCCG":81853, "CTCGA":73519, "CTCGT":57075, "CTCGC":70549, "CTCGG":76930, "CTGAA":66060, "CTGAT":61503, "CTGAC":51479, "CTGAG":52989, "CTGTA":27002, "CTGTT":74471, "CTGTC":49063, "CTGTG":50667, "CTGCA":71776, "CTGCT":134835, "CTGCC":111114, "CTGCG":78024, "CTGGA":99242, "CTGGT":95987, "CTGGC":110144, "CTGGG":101973, "CCAAA":87939, "CCAAT":56877, "CCAAC":105344, "CCAAG":79817, "CCATA":40134, "CCATT":56589, "CCATC":94367, "CCATG":69219, "CCACA":84574, "CCACT":49162, "CCACC":162182, "CCACG":77174, "CCAGA":83309, "CCAGT":71494, "CCAGC":150368, "CCAGG":115091, "CCTAA":24787, "CCTAT":31527, "CCTAC":42512, "CCTAG":20215, "CCTTA":27294, "CCTTT":74891, "CCTTC":118051, "CCTTG":96362, "CCTCA":73236, "CCTCT":70065, "CCTCC":159743, "CCTCG":94910, "CCTGA":75627, "CCTGT":75904, "CCTGC":153829, "CCTGG":115914, "CCCAA":95747, "CCCAT":66866, "CCCAC":104546, "CCCAG":108229, "CCCTA":33638, "CCCTT":66162, "CCCTC":88459, "CCCTG":91523, "CCCCA":109316, "CCCCT":78361, "CCCCC":84143, "CCCCG":91683, "CCCGA":78402, "CCCGT":53779, "CCCGC":108731, "CCCGG":95506, "CCGAA":77886, "CCGAT":71612, "CCGAC":80713, "CCGAG":80006, "CCGTA":36464, "CCGTT":54478, "CCGTC":76094, "CCGTG":59516, "CCGCA":84933, "CCGCT":79311, "CCGCC":174356, "CCGCG":93394, "CCGGA":84331, "CCGGT":84663, "CCGGC":138685, "CCGGG":92684, "CGAAA":66678, "CGAAT":45752, "CGAAC":64782, "CGAAG":89885, "CGATA":41963, "CGATT":52697, "CGATC":78207, "CGATG":92280, "CGACA":60498, "CGACT":53765, "CGACC":91134, "CGACG":88538, "CGAGA":68259, "CGAGT":38124, "CGAGC":75770, "CGAGG":91659, "CGTAA":29842, "CGTAT":23265, "CGTAC":26500, "CGTAG":34638, "CGTTA":20211, "CGTTT":48217, "CGTTC":59112, "CGTTG":59850, "CGTCA":55429, "CGTCT":49564, "CGTCC":68875, "CGTCG":84553, "CGTGA":46856, "CGTGT":30200, "CGTGC":51410, "CGTGG":71497, "CGCAA":54472, "CGCAT":43040, "CGCAC":57918, "CGCAG":75814, "CGCTA":25009, "CGCTT":59532, "CGCTC":66385, "CGCTG":88873, "CGCCA":109315, "CGCCT":104489, "CGCCC":112806, "CGCCG":162210, "CGCGA":62810, "CGCGT":43090, "CGCGC":85653, "CGCGG":92593, "CGGAA":69960, "CGGAT":58422, "CGGAC":49003, "CGGAG":76443, "CGGTA":43185, "CGGTT":64628, "CGGTC":72772, "CGGTG":92770, "CGGCA":99987, "CGGCT":101685, "CGGCC":121290, "CGGCG":155610, "CGGGA":70695, "CGGGT":68099, "CGGGC":90879, "CGGGG":85436, "GAAAA":96488, "GAAAT":69031, "GAAAC":67191, "GAAAG":75647, "GAATA":38380, "GAATT":49942, "GAATC":56211, "GAATG":47761, "GAACA":73531, "GAACT":60752, "GAACC":77819, "GAACG":56582, "GAAGA":112436, "GAAGT":60110, "GAAGC":100408, "GAAGG":107193, "GATAA":43670, "GATAT":42429, "GATAC":34825, "GATAG":39609, "GATTA":31850, "GATTT":67014, "GATTC":57427, "GATTG":57894, "GATCA":73970, "GATCT":63417, "GATCC":70525, "GATCG":75095, "GATGA":94545, "GATGT":58222, "GATGC":72456, "GATGG":93462, "GACAA":59088, "GACAT":47406, "GACAC":39420, "GACAG":48918, "GACTA":24170, "GACTT":55556, "GACTC":35732, "GACTG":45764, "GACCA":78550, "GACCT":65304, "GACCC":71303, "GACCG":74200, "GACGA":86452, "GACGT":41655, "GACGC":59850, "GACGG":71716, "GAGAA":94573, "GAGAT":66564, "GAGAC":58950, "GAGAG":56280, "GAGTA":26227, "GAGTT":50193, "GAGTC":33797, "GAGTG":34301, "GAGCA":82178, "GAGCT":55143, "GAGCC":72434, "GAGCG":62833, "GAGGA":129357, "GAGGT":70048, "GAGGC":90588, "GAGGG":76376, "GTAAA":29150, "GTAAT":26827, "GTAAC":27508, "GTAAG":20916, "GTATA":15523, "GTATT":31485, "GTATC":31827, "GTATG":27073, "GTACA":26219, "GTACT":25087, "GTACC":34354, "GTACG":28091, "GTAGA":36106, "GTAGT":28582, "GTAGC":38946, "GTAGG":35990, "GTTAA":18837, "GTTAT":29725, "GTTAC":33388, "GTTAG":18567, "GTTTA":26681, "GTTTT":70352, "GTTTC":66391, "GTTTG":68672, "GTTCA":59870, "GTTCT":65450, "GTTCC":86296, "GTTCG":65863, "GTTGA":69241, "GTTGT":63147, "GTTGC":67098, "GTTGG":93188, "GTCAA":52840, "GTCAT":47221, "GTCAC":43923, "GTCAG":47070, "GTCTA":22846, "GTCTT":58668, "GTCTC":57157, "GTCTG":50691, "GTCCA":59607, "GTCCT":64165, "GTCCC":58011, "GTCCG":49126, "GTCGA":70730, "GTCGT":59526, "GTCGC":67203, "GTCGG":74763, "GTGAA":58355, "GTGAT":58721, "GTGAC":41337, "GTGAG":42316, "GTGTA":20570, "GTGTT":46117, "GTGTC":35545, "GTGTG":40564, "GTGCA":42217, "GTGCT":58259, "GTGCC":61594, "GTGCG":52779, "GTGGA":70490, "GTGGT":87751, "GTGGC":84738, "GTGGG":84364, "GCAAA":60738, "GCAAT":48782, "GCAAC":65408, "GCAAG":66547, "GCATA":30622, "GCATT":46085, "GCATC":67510, "GCATG":50486, "GCACA":43713, "GCACT":33243, "GCACC":95553, "GCACG":53367, "GCAGA":72145, "GCAGT":45665, "GCAGC":110062, "GCAGG":138833, "GCTAA":21429, "GCTAT":34193, "GCTAC":43729, "GCTAG":18751, "GCTTA":25117, "GCTTT":67935, "GCTTC":105990, "GCTTG":75098, "GCTCA":62912, "GCTCT":54814, "GCTCC":87903, "GCTCG":76475, "GCTGA":78959, "GCTGT":62651, "GCTGC":113655, "GCTGG":142883, "GCCAA":91441, "GCCAT":74095, "GCCAC":88984, "GCCAG":108121, "GCCTA":34117, "GCCTT":80742, "GCCTC":95044, "GCCTG":114845, "GCCCA":98237, "GCCCT":79056, "GCCCC":91625, "GCCCG":94395, "GCCGA":115947, "GCCGT":84399, "GCCGC":148844, "GCCGG":134814, "GCGAA":68100, "GCGAT":69807, "GCGAC":69414, "GCGAG":67100, "GCGTA":26743, "GCGTT":50168, "GCGTC":56233, "GCGTG":53850, "GCGCA":69198, "GCGCT":67053, "GCGCC":113064, "GCGCG":84076, "GCGGA":80012, "GCGGT":84956, "GCGGC":141398, "GCGGG":100546, "GGAAA":81773, "GGAAT":56373, "GGAAC":79341, "GGAAG":99702, "GGATA":46826, "GGATT":65334, "GGATC":66891, "GGATG":86432, "GGACA":57838, "GGACT":44155, "GGACC":57088, "GGACG":64231, "GGAGA":107617, "GGAGT":47475, "GGAGC":82304, "GGAGG":141497, "GGTAA":32926, "GGTAT":35564, "GGTAC":35395, "GGTAG":47599, "GGTTA":29422, "GGTTT":81756, "GGTTC":77828, "GGTTG":106520, "GGTCA":65779, "GGTCT":66736, "GGTCC":55948, "GGTCG":81595, "GGTGA":91618, "GGTGT":61518, "GGTGC":86526, "GGTGG":134656, "GGCAA":83519, "GGCAT":69676, "GGCAC":62146, "GGCAG":100337, "GGCTA":45720, "GGCTT":87274, "GGCTC":72055, "GGCTG":121340, "GGCCA":100406, "GGCCT":87098, "GGCCC":76600, "GGCCG":119139, "GGCGA":119805, "GGCGT":73743, "GGCGC":109802, "GGCGG":161833, "GGGAA":71195, "GGGAT":68248, "GGGAC":52990, "GGGAG":82486, "GGGTA":35186, "GGGTT":83994, "GGGTC":64542, "GGGTG":93533, "GGGCA":82956, "GGGCT":78310, "GGGCC":74265, "GGGCG":103037, "GGGGA":80254, "GGGGT":79633, "GGGGC":83264, "GGGGG":69928 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/b2/AM-AL-35B_S45_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/b2/AM-AL-35B_S45_R2_001.fastq.gz -o AM-AL-35B.trim.R1.fastq.gz -O AM-AL-35B.trim.R2.fastq.gz -m --merged_out AM-AL-35B.trim.merged.fastq.gz " }