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"GCGTG":50782, "GCGCA":66748, "GCGCT":61228, "GCGCC":97463, "GCGCG":77478, "GCGGA":79194, "GCGGT":83511, "GCGGC":129244, "GCGGG":96431, "GGAAA":80129, "GGAAT":56357, "GGAAC":71563, "GGAAG":749225, "GGATA":47696, "GGATT":65666, "GGATC":65512, "GGATG":77714, "GGACA":56434, "GGACT":45288, "GGACC":52454, "GGACG":61233, "GGAGA":168548, "GGAGT":43782, "GGAGC":71018, "GGAGG":133829, "GGTAA":32604, "GGTAT":53955, "GGTAC":34806, "GGTAG":69888, "GGTTA":32226, "GGTTT":80775, "GGTTC":66069, "GGTTG":101432, "GGTCA":64131, "GGTCT":62884, "GGTCC":51125, "GGTCG":78090, "GGTGA":91240, "GGTGT":66022, "GGTGC":82199, "GGTGG":145693, "GGCAA":78680, "GGCAT":61497, "GGCAC":57468, "GGCAG":117603, "GGCTA":42101, "GGCTT":78035, "GGCTC":63454, "GGCTG":107572, "GGCCA":97321, "GGCCT":76113, "GGCCC":74383, "GGCCG":111609, "GGCGA":114619, "GGCGT":64819, "GGCGC":95915, "GGCGG":150563, "GGGAA":68489, "GGGAT":64291, "GGGAC":49349, "GGGAG":96640, "GGGTA":37848, "GGGTT":81779, "GGGTC":58647, "GGGTG":92132, "GGGCA":81363, "GGGCT":70741, "GGGCC":69635, "GGGCG":94246, "GGGGA":79809, "GGGGT":77673, "GGGGC":76845, "GGGGG":221469 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 1289998, "total_bases": 78689878, "q20_bases": 76401427, "q30_bases": 72593637, "total_cycles": 61, "quality_curves": { "A":[39.442,39.1412,39.1611,38.8502,38.9608,39.1915,39.1268,39.1249,39.1222,39.1661,39.1701,39.1523,39.204,39.1993,39.1176,39.1267,39.216,39.142,39.2304,39.1148,38.4117,39.1153,39.1788,39.1991,38.5102,39.1103,39.1477,38.3222,39.0227,37.9105,39.0769,39.1775,39.0713,38.9022,38.3461,39.0007,38.4005,38.6554,38.9098,39.021,38.4465,38.6369,38.8109,38.649,38.6441,38.7782,38.7644,37.7704,38.393,37.6452,37.4071,36.9813,37.8027,37.5649,37.1188,35.6857,35.3212,34.6969,34.2157,34.4075,33.4173], 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"CCTGG":96107, "CCCAA":92796, "CCCAT":58694, "CCCAC":102740, "CCCAG":93126, "CCCTA":29136, "CCCTT":62935, "CCCTC":83671, "CCCTG":77586, "CCCCA":104708, "CCCCT":72590, "CCCCC":87644, "CCCCG":82930, "CCCGA":68687, "CCCGT":49699, "CCCGC":103035, "CCCGG":84901, "CCGAA":69177, "CCGAT":67708, "CCGAC":73665, "CCGAG":70914, "CCGTA":32949, "CCGTT":49620, "CCGTC":66635, "CCGTG":51395, "CCGCA":74514, "CCGCT":70629, "CCGCC":156691, "CCGCG":84630, "CCGGA":73882, "CCGGT":75492, "CCGGC":116911, "CCGGG":80569, "CGAAA":56161, "CGAAT":44818, "CGAAC":56365, "CGAAG":69534, "CGATA":36300, "CGATT":48996, "CGATC":78593, "CGATG":79147, "CGACA":50794, "CGACT":45535, "CGACC":83082, "CGACG":80318, "CGAGA":58179, "CGAGT":32753, "CGAGC":63532, "CGAGG":73911, "CGTAA":26042, "CGTAT":20915, "CGTAC":24253, "CGTAG":29901, "CGTTA":17072, "CGTTT":41186, "CGTTC":52850, "CGTTG":50581, "CGTCA":46268, "CGTCT":43519, "CGTCC":59938, "CGTCG":74035, "CGTGA":42229, "CGTGT":27644, "CGTGC":41548, "CGTGG":59768, "CGCAA":47010, "CGCAT":37714, "CGCAC":52656, "CGCAG":58018, "CGCTA":21257, "CGCTT":50056, "CGCTC":59031, "CGCTG":72254, "CGCCA":91525, "CGCCT":83360, "CGCCC":99907, "CGCCG":137571, "CGCGA":55542, "CGCGT":38617, "CGCGC":71258, "CGCGG":82177, "CGGAA":59538, "CGGAT":54961, "CGGAC":42096, "CGGAG":62759, "CGGTA":37445, "CGGTT":57277, "CGGTC":63853, "CGGTG":86189, "CGGCA":84586, "CGGCT":82335, "CGGCC":102823, "CGGCG":129590, "CGGGA":62798, "CGGGT":60088, "CGGGC":75878, "CGGGG":70918, "GAAAA":78595, "GAAAT":56917, "GAAAC":57701, "GAAAG":58240, "GAATA":34641, "GAATT":48111, "GAATC":53761, "GAATG":42561, "GAACA":58410, "GAACT":52260, "GAACC":65785, "GAACG":49745, "GAAGA":90328, "GAAGT":48561, "GAAGC":78632, "GAAGG":82384, "GATAA":36855, "GATAT":37380, "GATAC":28883, "GATAG":31193, "GATTA":27795, "GATTT":67014, "GATTC":56345, "GATTG":50547, "GATCA":65686, "GATCT":68481, "GATCC":66360, "GATCG":71529, "GATGA":85091, "GATGT":49992, "GATGC":59870, "GATGG":79511, "GACAA":50815, "GACAT":39685, "GACAC":34572, "GACAG":37992, "GACTA":20191, "GACTT":51280, "GACTC":30813, "GACTG":37610, "GACCA":70227, "GACCT":52814, "GACCC":63491, "GACCG":67219, "GACGA":73677, "GACGT":35246, "GACGC":53107, "GACGG":61653, "GAGAA":74101, "GAGAT":62163, "GAGAC":50121, "GAGAG":49297, "GAGTA":21008, "GAGTT":43734, "GAGTC":27250, "GAGTG":28921, "GAGCA":66922, "GAGCT":42562, "GAGCC":58068, "GAGCG":50860, "GAGGA":112339, "GAGGT":55519, "GAGGC":70844, "GAGGG":64440, "GTAAA":25072, "GTAAT":25631, "GTAAC":23528, "GTAAG":17477, "GTATA":13628, "GTATT":29113, "GTATC":27348, "GTATG":25255, "GTACA":25955, "GTACT":23895, "GTACC":31391, "GTACG":24711, "GTAGA":33320, "GTAGT":25337, "GTAGC":34782, "GTAGG":27975, "GTTAA":16649, "GTTAT":24586, "GTTAC":27992, "GTTAG":15774, "GTTTA":25437, "GTTTT":66968, "GTTTC":59380, "GTTTG":61992, "GTTCA":49559, "GTTCT":54116, "GTTCC":73400, "GTTCG":54221, "GTTGA":58408, "GTTGT":61369, "GTTGC":56547, "GTTGG":86859, "GTCAA":41433, "GTCAT":41736, "GTCAC":38146, "GTCAG":37600, "GTCTA":21117, "GTCTT":49295, "GTCTC":50996, "GTCTG":43577, "GTCCA":53943, "GTCCT":53199, "GTCCC":50241, "GTCCG":42642, "GTCGA":62200, "GTCGT":51246, "GTCGC":56456, "GTCGG":62743, "GTGAA":51807, "GTGAT":50347, "GTGAC":35562, "GTGAG":37218, "GTGTA":17705, "GTGTT":47460, "GTGTC":30388, "GTGTG":42882, "GTGCA":34878, "GTGCT":50697, "GTGCC":52600, "GTGCG":45045, "GTGGA":63778, "GTGGT":86486, "GTGGC":71244, "GTGGG":78264, "GCAAA":49692, "GCAAT":41719, "GCAAC":55288, "GCAAG":51241, "GCATA":24384, "GCATT":42722, "GCATC":57284, "GCATG":44368, "GCACA":39690, "GCACT":28176, "GCACC":83649, "GCACG":43451, "GCAGA":55852, "GCAGT":40339, "GCAGC":89456, "GCAGG":111005, "GCTAA":17276, "GCTAT":26286, "GCTAC":37590, "GCTAG":16608, "GCTTA":21586, "GCTTT":58877, "GCTTC":85364, "GCTTG":61552, "GCTCA":49018, "GCTCT":48982, "GCTCC":73636, "GCTCG":66698, "GCTGA":64273, "GCTGT":51159, "GCTGC":92210, "GCTGG":117950, "GCCAA":74306, "GCCAT":60843, "GCCAC":77295, "GCCAG":84831, "GCCTA":24057, "GCCTT":66549, "GCCTC":76628, "GCCTG":88970, "GCCCA":84669, "GCCCT":68755, "GCCCC":81507, "GCCCG":81398, "GCCGA":102666, "GCCGT":70886, "GCCGC":124841, "GCCGG":111763, "GCGAA":54371, "GCGAT":62865, "GCGAC":59148, "GCGAG":53104, "GCGTA":21228, "GCGTT":41541, "GCGTC":47976, "GCGTG":45552, "GCGCA":53128, "GCGCT":54052, "GCGCC":86641, "GCGCG":67753, "GCGGA":66028, "GCGGT":76922, "GCGGC":116144, "GCGGG":87322, "GGAAA":67956, "GGAAT":53120, "GGAAC":65983, "GGAAG":78492, "GGATA":38901, "GGATT":61803, "GGATC":60862, "GGATG":71695, "GGACA":46645, "GGACT":41959, "GGACC":48146, "GGACG":55137, "GGAGA":92086, "GGAGT":40803, "GGAGC":65053, "GGAGG":122187, "GGTAA":27337, "GGTAT":32692, "GGTAC":32009, "GGTAG":39156, "GGTTA":24389, "GGTTT":76173, "GGTTC":61764, "GGTTG":94798, "GGTCA":53597, "GGTCT":58279, "GGTCC":47177, "GGTCG":70209, "GGTGA":78254, "GGTGT":61437, "GGTGC":74820, "GGTGG":134478, "GGCAA":66567, "GGCAT":56769, "GGCAC":51793, "GGCAG":80581, "GGCTA":32918, "GGCTT":73022, "GGCTC":59380, "GGCTG":99015, "GGCCA":80562, "GGCCT":70147, "GGCCC":68401, "GGCCG":99939, "GGCGA":98649, "GGCGT":59185, "GGCGC":83950, "GGCGG":136410, "GGGAA":58228, "GGGAT":59712, "GGGAC":45295, "GGGAG":70964, "GGGTA":28485, "GGGTT":76679, "GGGTC":54479, "GGGTG":84291, "GGGCA":66959, "GGGCT":65889, "GGGCC":64202, "GGGCG":84813, "GGGGA":68073, "GGGGT":71457, "GGGGC":70749, "GGGGG":65453 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/b2/AM-AL-33B_S39_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/b2/AM-AL-33B_S39_R2_001.fastq.gz -o AM-AL-33B.trim.R1.fastq.gz -O AM-AL-33B.trim.R2.fastq.gz -m --merged_out AM-AL-33B.trim.merged.fastq.gz " }