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"CGGAT":60443, "CGGAC":46433, "CGGAG":86662, "CGGTA":47277, "CGGTT":61765, "CGGTC":69056, "CGGTG":97312, "CGGCA":103652, "CGGCT":90731, "CGGCC":114065, "CGGCG":150149, "CGGGA":74050, "CGGGT":65051, "CGGGC":84639, "CGGGG":80192, "GAAAA":91591, "GAAAT":63888, "GAAAC":62178, "GAAAG":77412, "GAATA":40154, "GAATT":51666, "GAATC":57124, "GAATG":46475, "GAACA":67191, "GAACT":187777, "GAACC":69796, "GAACG":55487, "GAAGA":600779, "GAAGT":55082, "GAAGC":89769, "GAAGG":95702, "GATAA":43113, "GATAT":41643, "GATAC":31960, "GATAG":49528, "GATTA":32977, "GATTT":70582, "GATTC":60554, "GATTG":54250, "GATCA":76890, "GATCT":81507, "GATCC":72194, "GATCG":653276, "GATGA":98507, "GATGT":53610, "GATGC":66019, "GATGG":86567, "GACAA":57826, "GACAT":43568, "GACAC":37722, "GACAG":55520, "GACTA":23367, "GACTT":52818, "GACTC":33553, "GACTG":41365, "GACCA":79840, "GACCT":57737, "GACCC":67503, "GACCG":74406, "GACGA":84494, "GACGT":38050, "GACGC":57652, "GACGG":69415, "GAGAA":86821, "GAGAT":203160, "GAGAC":57020, "GAGAG":64159, "GAGTA":25518, "GAGTT":48056, "GAGTC":30852, "GAGTG":32609, "GAGCA":455932, "GAGCT":47488, "GAGCC":65058, "GAGCG":59813, "GAGGA":130279, "GAGGT":63877, "GAGGC":80005, "GAGGG":72376, "GTAAA":29340, "GTAAT":27894, "GTAAC":25431, "GTAAG":25801, "GTATA":16683, "GTATT":31646, "GTATC":29353, "GTATG":26304, "GTACA":28626, "GTACT":25330, "GTACC":33821, "GTACG":27243, "GTAGA":88406, "GTAGT":27977, "GTAGC":37730, "GTAGG":32305, "GTTAA":19082, "GTTAT":26371, "GTTAC":29354, "GTTAG":29194, "GTTTA":29809, "GTTTT":70003, "GTTTC":62710, "GTTTG":65547, "GTTCA":55322, "GTTCT":58355, "GTTCC":76891, "GTTCG":58414, "GTTGA":66035, "GTTGT":63255, "GTTGC":60515, "GTTGG":90820, "GTCAA":69034, "GTCAT":44900, "GTCAC":84346, "GTCAG":53000, "GTCTA":25442, "GTCTT":52338, "GTCTC":52258, "GTCTG":246672, "GTCCA":59427, "GTCCT":56952, "GTCCC":51717, "GTCCG":46036, "GTCGA":71642, "GTCGT":55580, "GTCGC":62596, "GTCGG":69214, "GTGAA":61484, "GTGAT":56576, "GTGAC":38986, "GTGAG":50293, "GTGTA":21554, "GTGTT":49877, "GTGTC":32702, "GTGTG":44788, "GTGCA":40795, "GTGCT":55190, "GTGCC":56215, "GTGCG":49358, "GTGGA":73151, "GTGGT":91856, "GTGGC":78482, "GTGGG":84494, "GCAAA":58591, "GCAAT":45388, "GCAAC":61047, "GCAAG":71585, "GCATA":31155, "GCATT":45513, "GCATC":62195, "GCATG":48172, "GCACA":376298, "GCACT":30860, "GCACC":89702, "GCACG":49095, "GCAGA":124889, "GCAGT":43892, "GCAGC":100471, "GCAGG":126656, "GCTAA":21599, "GCTAT":28927, "GCTAC":41097, "GCTAG":32360, "GCTTA":28296, "GCTTT":63320, "GCTTC":91356, "GCTTG":68204, "GCTCA":56784, "GCTCT":51896, "GCTCC":77359, "GCTCG":71666, "GCTGA":74868, "GCTGT":55498, "GCTGC":101586, "GCTGG":130312, "GCCAA":87200, "GCCAT":67063, "GCCAC":84138, "GCCAG":118021, "GCCTA":31970, "GCCTT":69680, "GCCTC":81470, "GCCTG":97085, "GCCCA":98062, "GCCCT":73374, "GCCCC":86375, "GCCCG":88871, "GCCGA":118515, "GCCGT":78148, "GCCGC":139016, "GCCGG":127205, "GCGAA":67274, "GCGAT":70690, "GCGAC":66990, "GCGAG":71738, "GCGTA":27128, "GCGTT":45354, "GCGTC":52886, "GCGTG":50580, "GCGCA":64875, "GCGCT":60296, "GCGCC":97117, "GCGCG":76143, "GCGGA":81367, "GCGGT":84633, "GCGGC":131879, "GCGGG":98727, "GGAAA":81461, "GGAAT":58293, "GGAAC":72658, "GGAAG":576586, "GGATA":48846, "GGATT":65954, "GGATC":67089, "GGATG":79458, "GGACA":55038, "GGACT":43604, "GGACC":52911, "GGACG":62706, "GGAGA":156303, "GGAGT":45163, "GGAGC":75260, "GGAGG":137050, "GGTAA":34062, "GGTAT":35098, "GGTAC":34916, "GGTAG":64727, "GGTTA":31597, "GGTTT":80328, "GGTTC":67405, "GGTTG":99898, "GGTCA":64048, "GGTCT":61421, "GGTCC":50739, "GGTCG":77901, "GGTGA":93295, "GGTGT":65609, "GGTGC":81742, "GGTGG":146630, "GGCAA":80835, "GGCAT":62456, "GGCAC":58172, "GGCAG":114531, "GGCTA":41724, "GGCTT":80144, "GGCTC":64076, "GGCTG":108807, "GGCCA":97363, "GGCCT":75313, "GGCCC":73940, "GGCCG":113185, "GGCGA":119474, "GGCGT":65736, "GGCGC":96066, "GGCGG":155487, "GGGAA":70558, "GGGAT":65869, "GGGAC":49887, "GGGAG":94252, "GGGTA":37074, "GGGTT":80603, "GGGTC":59205, "GGGTG":90966, "GGGCA":81328, 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"GC":[0.603941,0.578304,0.603375,0.598699,0.598464,0.541387,0.552476,0.539706,0.5292,0.54617,0.551671,0.546055,0.555391,0.5581,0.554174,0.5611,0.56417,0.554459,0.560294,0.559546,0.553816,0.562608,0.563595,0.553314,0.56139,0.562555,0.55198,0.559764,0.561009,0.553447,0.557475,0.559204,0.550931,0.557436,0.559417,0.551821,0.555807,0.557561,0.551649,0.556955,0.556785,0.550132,0.55557,0.556895,0.550002,0.557111,0.559036,0.550894,0.55499,0.559483,0.551409,0.556374,0.555504,0.55049,0.555046,0.555897,0.549419,0.55619,0.55639,0.54954,0.555436,0.558993,0.553264,0.557945,0.55707,0.552097,0.557671,0.558493,0.554121,0.559029,0.55951,0.549928,0.560608,0.560895,0.55841,0.558703,0.558971,0.562648,0.563106,0.561722,0.557867,0.571395,0.567167,0.564144,0.585728,0.585288,0.585579,0.588643,0.577007,0.54921,0.520875] }, "kmer_count": { "AAAAA":90669, "AAAAT":59523, "AAAAC":65806, "AAAAG":65113, "AAATA":38935, "AAATT":46869, "AAATC":59578, "AAATG":45239, "AAACA":52836, "AAACT":41379, "AAACC":79616, 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"CTTGT":55709, "CTTGC":57745, "CTTGG":70231, "CTCAA":54361, "CTCAT":43565, "CTCAC":44898, "CTCAG":42205, "CTCTA":27542, "CTCTT":60426, "CTCTC":54013, "CTCTG":48815, "CTCCA":86121, "CTCCT":120310, "CTCCC":87264, "CTCCG":70045, "CTCGA":63650, "CTCGT":49420, "CTCGC":60255, "CTCGG":68218, "CTGAA":55311, "CTGAT":55472, "CTGAC":43126, "CTGAG":42917, "CTGTA":23330, "CTGTT":61657, "CTGTC":40328, "CTGTG":40590, "CTGCA":62001, "CTGCT":111958, "CTGCC":94955, "CTGCG":63892, "CTGGA":84143, "CTGGT":85303, "CTGGC":90606, "CTGGG":86959, "CCAAA":84075, "CCAAT":51123, "CCAAC":94999, "CCAAG":71012, "CCATA":35295, "CCATT":50423, "CCATC":82901, "CCATG":59660, "CCACA":75396, "CCACT":42837, "CCACC":164694, "CCACG":65569, "CCAGA":74307, "CCAGT":58712, "CCAGC":126293, "CCAGG":97111, "CCTAA":20656, "CCTAT":26986, "CCTAC":35315, "CCTAG":15352, "CCTTA":21544, "CCTTT":66446, "CCTTC":99456, "CCTTG":78738, "CCTCA":65486, "CCTCT":59277, "CCTCC":139954, "CCTCG":80646, "CCTGA":63186, "CCTGT":59789, "CCTGC":128401, "CCTGG":97144, "CCCAA":87997, "CCCAT":57102, "CCCAC":99057, "CCCAG":93401, "CCCTA":28053, "CCCTT":61157, "CCCTC":80576, "CCCTG":76449, "CCCCA":100361, "CCCCT":69447, "CCCCC":82852, "CCCCG":82474, "CCCGA":68760, "CCCGT":48534, "CCCGC":101013, "CCCGG":86824, "CCGAA":68167, "CCGAT":67773, "CCGAC":73540, "CCGAG":72905, "CCGTA":33212, "CCGTT":49278, "CCGTC":67495, "CCGTG":51770, "CCGCA":74706, "CCGCT":71090, "CCGCC":156619, "CCGCG":86908, "CCGGA":76790, "CCGGT":77171, "CCGGC":121371, "CCGGG":82830, "CGAAA":56994, "CGAAT":43813, "CGAAC":54300, "CGAAG":74704, "CGATA":36479, "CGATT":48427, "CGATC":78089, "CGATG":82200, "CGACA":52374, "CGACT":44837, "CGACC":83226, "CGACG":81792, "CGAGA":60536, "CGAGT":33706, "CGAGC":66552, "CGAGG":78477, "CGTAA":26648, "CGTAT":20958, "CGTAC":24540, "CGTAG":31323, "CGTTA":16815, "CGTTT":40665, "CGTTC":51847, "CGTTG":51378, "CGTCA":47050, "CGTCT":42956, "CGTCC":59291, "CGTCG":75629, "CGTGA":43737, "CGTGT":27133, "CGTGC":42116, "CGTGG":60496, "CGCAA":47492, "CGCAT":37854, "CGCAC":51508, "CGCAG":61500, "CGCTA":21517, "CGCTT":50154, "CGCTC":58397, "CGCTG":74860, "CGCCA":93469, "CGCCT":83469, "CGCCC":99434, "CGCCG":141488, "CGCGA":57535, "CGCGT":38183, "CGCGC":71847, "CGCGG":85414, "CGGAA":62327, "CGGAT":56663, "CGGAC":43092, "CGGAG":66919, "CGGTA":38159, "CGGTT":58300, "CGGTC":64483, "CGGTG":90364, "CGGCA":89474, "CGGCT":85797, "CGGCC":106169, "CGGCG":138361, "CGGGA":66152, "CGGGT":61031, "CGGGC":78881, "CGGGG":74380, "GAAAA":81952, "GAAAT":60093, "GAAAC":58448, "GAAAG":61351, "GAATA":35505, "GAATT":49150, "GAATC":54035, "GAATG":43942, "GAACA":58649, "GAACT":52230, "GAACC":64552, "GAACG":51395, "GAAGA":97737, "GAAGT":50539, "GAAGC":83317, "GAAGG":89242, "GATAA":38848, "GATAT":39350, "GATAC":29779, "GATAG":32589, "GATTA":28870, "GATTT":66959, "GATTC":56969, "GATTG":51065, "GATCA":68255, "GATCT":67116, "GATCC":67349, "GATCG":74930, "GATGA":89944, "GATGT":50045, "GATGC":61819, "GATGG":81591, "GACAA":51989, "GACAT":40751, "GACAC":35150, "GACAG":39846, "GACTA":19992, "GACTT":50209, "GACTC":31106, "GACTG":38140, "GACCA":70557, "GACCT":54061, "GACCC":63088, "GACCG":68775, "GACGA":76061, "GACGT":35102, "GACGC":53210, "GACGG":65496, "GAGAA":78813, "GAGAT":64565, "GAGAC":53088, "GAGAG":50955, "GAGTA":21835, "GAGTT":45123, "GAGTC":28956, "GAGTG":30452, "GAGCA":71200, "GAGCT":44135, "GAGCC":60754, "GAGCG":54790, "GAGGA":118190, "GAGGT":59085, "GAGGC":74775, "GAGGG":67010, "GTAAA":26977, "GTAAT":26491, "GTAAC":23213, "GTAAG":18209, "GTATA":14123, "GTATT":29897, "GTATC":27176, "GTATG":24819, "GTACA":25687, "GTACT":23819, "GTACC":32028, "GTACG":25124, "GTAGA":34553, "GTAGT":26494, "GTAGC":34915, "GTAGG":29993, "GTTAA":17142, "GTTAT":25061, "GTTAC":27501, "GTTAG":16112, "GTTTA":25333, "GTTTT":66225, "GTTTC":58801, "GTTTG":61885, "GTTCA":49752, "GTTCT":54727, "GTTCC":72576, "GTTCG":54463, "GTTGA":60403, "GTTGT":59863, "GTTGC":57134, "GTTGG":86085, "GTCAA":42985, "GTCAT":41984, "GTCAC":38010, "GTCAG":38906, "GTCTA":20647, "GTCTT":49233, "GTCTC":50449, "GTCTG":43331, "GTCCA":52941, "GTCCT":53445, "GTCCC":49036, "GTCCG":43114, "GTCGA":63423, "GTCGT":51369, "GTCGC":58491, "GTCGG":64387, "GTGAA":54154, "GTGAT":52180, "GTGAC":35943, "GTGAG":39499, "GTGTA":17519, "GTGTT":46869, "GTGTC":30528, "GTGTG":41599, "GTGCA":35296, "GTGCT":51485, "GTGCC":52662, "GTGCG":45794, "GTGGA":65572, "GTGGT":86875, "GTGGC":73656, "GTGGG":78566, "GCAAA":51193, "GCAAT":42781, "GCAAC":56756, "GCAAG":54317, "GCATA":25784, "GCATT":43040, "GCATC":57738, "GCATG":44739, "GCACA":39383, "GCACT":29033, "GCACC":83562, "GCACG":44554, "GCAGA":59623, "GCAGT":41491, "GCAGC":93754, "GCAGG":116759, "GCTAA":18153, "GCTAT":26810, "GCTAC":38045, "GCTAG":16974, "GCTTA":22398, "GCTTT":59589, "GCTTC":85554, "GCTTG":64134, "GCTCA":50335, "GCTCT":48854, "GCTCC":73412, "GCTCG":66648, "GCTGA":66452, "GCTGT":51381, "GCTGC":94916, "GCTGG":122111, "GCCAA":76077, "GCCAT":62534, "GCCAC":78020, "GCCAG":88587, "GCCTA":24989, "GCCTT":65583, "GCCTC":76820, "GCCTG":90394, "GCCCA":85410, "GCCCT":68984, "GCCCC":80680, "GCCCG":82156, "GCCGA":105178, "GCCGT":73061, "GCCGC":128541, "GCCGG":117292, "GCGAA":57627, "GCGAT":65526, "GCGAC":61739, "GCGAG":56416, "GCGTA":22080, "GCGTT":42144, "GCGTC":48756, "GCGTG":46271, "GCGCA":55110, "GCGCT":55036, "GCGCC":89152, "GCGCG":69258, "GCGGA":71079, "GCGGT":80046, "GCGGC":123013, "GCGGG":91814, "GGAAA":70697, "GGAAT":55364, "GGAAC":68118, "GGAAG":83271, "GGATA":41483, "GGATT":62392, "GGATC":62915, "GGATG":74459, "GGACA":48043, "GGACT":41037, "GGACC":49740, "GGACG":57688, "GGAGA":96715, "GGAGT":42474, "GGAGC":70544, "GGAGG":126351, "GGTAA":29608, "GGTAT":32951, "GGTAC":32641, "GGTAG":40700, "GGTTA":25478, "GGTTT":76259, "GGTTC":63602, "GGTTG":94508, "GGTCA":55672, "GGTCT":57792, "GGTCC":47405, "GGTCG":72201, "GGTGA":82288, "GGTGT":61711, "GGTGC":76257, "GGTGG":137697, "GGCAA":70493, "GGCAT":58569, "GGCAC":54291, "GGCAG":86139, "GGCTA":34381, "GGCTT":74932, "GGCTC":60841, "GGCTG":101958, "GGCCA":83905, "GGCCT":70906, "GGCCC":69282, "GGCCG":104256, "GGCGA":105976, "GGCGT":61114, "GGCGC":87243, "GGCGG":144966, "GGGAA":61584, "GGGAT":61942, "GGGAC":46390, "GGGAG":74308, "GGGTA":29850, "GGGTT":76289, "GGGTC":55713, "GGGTG":84367, "GGGCA":70101, "GGGCT":67918, "GGGCC":65173, "GGGCG":89480, "GGGGA":70798, "GGGGT":71345, "GGGGC":73097, "GGGGG":64651 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/b2/AM-AL-33A_S38_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/b2/AM-AL-33A_S38_R2_001.fastq.gz -o AM-AL-33A.trim.R1.fastq.gz -O AM-AL-33A.trim.R2.fastq.gz -m --merged_out AM-AL-33A.trim.merged.fastq.gz " }