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"GCGCT":41186, "GCGCC":65117, "GCGCG":50909, "GCGGA":56174, "GCGGT":56375, "GCGGC":83303, "GCGGG":65695, "GGAAA":69229, "GGAAT":45307, "GGAAC":49331, "GGAAG":825804, "GGATA":37227, "GGATT":49033, "GGATC":40600, "GGATG":61541, "GGACA":46447, "GGACT":30399, "GGACC":36902, "GGACG":47583, "GGAGA":173217, "GGAGT":34199, "GGAGC":60392, "GGAGG":191623, "GGTAA":27017, "GGTAT":25313, "GGTAC":24113, "GGTAG":55559, "GGTTA":25986, "GGTTT":63270, "GGTTC":44174, "GGTTG":80124, "GGTCA":46096, "GGTCT":43456, "GGTCC":35511, "GGTCG":52296, "GGTGA":70744, "GGTGT":54720, "GGTGC":60604, "GGTGG":129311, "GGCAA":58688, "GGCAT":44511, "GGCAC":39411, "GGCAG":95981, "GGCTA":31512, "GGCTT":58305, "GGCTC":42241, "GGCTG":74232, "GGCCA":64832, "GGCCT":49212, "GGCCC":44941, "GGCCG":68130, "GGCGA":110021, "GGCGT":46468, "GGCGC":63063, "GGCGG":101543, "GGGAA":58793, "GGGAT":48285, "GGGAC":36557, "GGGAG":120127, "GGGTA":29889, "GGGTT":64886, "GGGTC":41233, "GGGTG":79442, "GGGCA":64380, "GGGCT":49768, "GGGCC":42959, "GGGCG":66798, "GGGGA":79952, "GGGGT":66977, "GGGGC":55338, "GGGGG":204734 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 1113112, "total_bases": 67899832, "q20_bases": 65090537, "q30_bases": 61347282, "total_cycles": 61, "quality_curves": { "A":[39.3658,39.1055,39.1646,38.933,39.0032,39.1957,39.0912,39.1198,39.169,39.1592,39.1584,39.1462,39.1672,39.1689,39.0958,39.0842,39.1975,39.1138,39.1867,39.1002,38.3359,39.0782,39.1509,39.1681,38.4316,39.0767,39.1139,38.2188,38.9483,37.8229,39.0345,39.1424,38.9989,39.0404,38.9065,38.9501,38.9238,38.951,38.7654,38.2153,38.5847,37.602,38.3345,38.0433,37.9376,38.2624,38.2082,36.613,37.3878,36.23,35.8487,35.247,36.4611,36.0478,35.435,33.6495,33.4253,32.7443,32.3367,32.6746,31.5589], 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"CCTGC":98348, "CCTGG":59822, "CCCAA":72159, "CCCAT":46171, "CCCAC":86676, "CCCAG":59510, "CCCTA":24409, "CCCTT":56034, "CCCTC":117108, "CCCTG":52744, "CCCCA":84174, "CCCCT":72576, "CCCCC":85295, "CCCCG":53284, "CCCGA":39538, "CCCGT":32690, "CCCGC":65188, "CCCGG":48003, "CCGAA":41094, "CCGAT":39623, "CCGAC":43321, "CCGAG":43038, "CCGTA":22389, "CCGTT":32180, "CCGTC":45380, "CCGTG":32369, "CCGCA":46734, "CCGCT":45937, "CCGCC":98655, "CCGCG":49479, "CCGGA":42005, "CCGGT":42351, "CCGGC":66182, "CCGGG":45618, "CGAAA":38557, "CGAAT":27246, "CGAAC":34086, "CGAAG":45437, "CGATA":24206, "CGATT":32943, "CGATC":41288, "CGATG":49221, "CGACA":34662, "CGACT":28347, "CGACC":49950, "CGACG":49561, "CGAGA":37857, "CGAGT":21915, "CGAGC":39374, "CGAGG":51809, "CGTAA":20072, "CGTAT":15694, "CGTAC":16893, "CGTAG":21163, "CGTTA":13171, "CGTTT":29336, "CGTTC":34048, "CGTTG":35420, "CGTCA":30766, "CGTCT":31113, "CGTCC":44191, "CGTCG":48556, "CGTGA":29397, "CGTGT":20250, "CGTGC":27757, "CGTGG":39815, "CGCAA":32187, "CGCAT":25432, "CGCAC":35512, "CGCAG":37724, "CGCTA":14254, "CGCTT":34754, "CGCTC":36562, "CGCTG":48160, "CGCCA":57441, "CGCCT":55675, "CGCCC":66595, "CGCCG":80291, "CGCGA":31617, "CGCGT":23934, "CGCGC":43881, "CGCGG":48077, "CGGAA":40187, "CGGAT":32384, "CGGAC":25909, "CGGAG":41772, "CGGTA":22619, "CGGTT":35168, "CGGTC":37939, "CGGTG":54753, "CGGCA":52873, "CGGCT":50214, "CGGCC":58838, "CGGCG":75655, "CGGGA":37699, "CGGGT":37141, "CGGGC":43759, "CGGGG":45608, "GAAAA":62539, "GAAAT":43535, "GAAAC":41643, "GAAAG":47051, "GAATA":25807, "GAATT":34737, "GAATC":35075, "GAATG":31887, "GAACA":39802, "GAACT":32963, "GAACC":40777, "GAACG":32303, "GAAGA":76526, "GAAGT":34316, "GAAGC":57472, "GAAGG":73310, "GATAA":28695, "GATAT":26125, "GATAC":20035, "GATAG":22659, "GATTA":21575, "GATTT":47773, "GATTC":36284, "GATTG":36662, "GATCA":39704, "GATCT":39466, "GATCC":37293, "GATCG":38795, "GATGA":61384, "GATGT":34924, "GATGC":40041, "GATGG":58644, "GACAA":38061, "GACAT":29092, "GACAC":24700, "GACAG":27945, "GACTA":13582, "GACTT":33818, "GACTC":20764, "GACTG":25083, "GACCA":45085, "GACCT":34307, "GACCC":40549, "GACCG":38403, "GACGA":51890, "GACGT":23364, "GACGC":32874, "GACGG":40487, "GAGAA":60762, "GAGAT":44140, "GAGAC":37281, "GAGAG":45635, "GAGTA":15866, "GAGTT":30751, "GAGTC":19633, "GAGTG":23519, "GAGCA":53002, "GAGCT":29256, "GAGCC":36122, "GAGCG":32164, "GAGGA":135439, "GAGGT":42031, "GAGGC":48876, "GAGGG":81095, "GTAAA":20929, "GTAAT":19276, "GTAAC":17550, "GTAAG":15262, "GTATA":10299, "GTATT":21786, "GTATC":19045, "GTATG":19996, "GTACA":19490, "GTACT":16782, "GTACC":21437, "GTACG":17032, "GTAGA":24954, "GTAGT":20920, "GTAGC":26127, "GTAGG":23648, "GTTAA":13241, "GTTAT":17766, "GTTAC":19962, "GTTAG":13216, "GTTTA":20255, "GTTTT":53008, "GTTTC":42273, "GTTTG":49223, "GTTCA":32361, "GTTCT":37315, "GTTCC":49017, "GTTCG":32773, "GTTGA":42107, "GTTGT":50309, "GTTGC":40236, "GTTGG":68368, "GTCAA":28606, "GTCAT":28778, "GTCAC":24387, "GTCAG":24749, "GTCTA":15177, "GTCTT":35394, "GTCTC":38509, "GTCTG":29181, "GTCCA":38961, "GTCCT":42396, "GTCCC":34693, "GTCCG":25893, "GTCGA":39009, "GTCGT":37782, "GTCGC":35472, "GTCGG":38893, "GTGAA":38879, "GTGAT":35825, "GTGAC":23245, "GTGAG":30501, "GTGTA":13854, "GTGTT":36992, "GTGTC":22420, "GTGTG":39768, "GTGCA":25461, "GTGCT":38460, "GTGCC":33782, "GTGCG":30271, "GTGGA":49115, "GTGGT":74547, "GTGGC":48559, "GTGGG":63663, "GCAAA":38481, "GCAAT":29377, "GCAAC":40496, "GCAAG":40237, "GCATA":18607, "GCATT":31774, "GCATC":38220, "GCATG":32833, "GCACA":30512, "GCACT":19861, "GCACC":58053, "GCACG":28829, "GCAGA":39738, "GCAGT":29923, "GCAGC":81849, "GCAGG":85753, "GCTAA":13903, "GCTAT":18490, "GCTAC":27938, "GCTAG":14412, "GCTTA":17135, "GCTTT":43900, "GCTTC":60669, "GCTTG":49564, "GCTCA":31920, "GCTCT":32782, "GCTCC":56971, "GCTCG":40336, "GCTGA":42124, "GCTGT":40908, "GCTGC":82523, "GCTGG":80264, "GCCAA":51832, "GCCAT":38403, "GCCAC":51666, "GCCAG":52852, "GCCTA":17365, "GCCTT":45287, "GCCTC":54108, "GCCTG":56523, "GCCCA":54706, "GCCCT":51263, "GCCCC":54994, "GCCCG":46228, "GCCGA":58352, "GCCGT":43994, "GCCGC":75864, "GCCGG":63773, "GCGAA":35092, "GCGAT":36836, "GCGAC":36708, "GCGAG":35342, "GCGTA":14582, "GCGTT":28473, "GCGTC":31791, "GCGTG":32023, "GCGCA":34969, "GCGCT":34300, "GCGCC":54414, "GCGCG":41160, "GCGGA":42326, "GCGGT":48587, "GCGGC":69626, "GCGGG":54797, "GGAAA":55195, "GGAAT":40453, "GGAAC":43092, "GGAAG":71305, "GGATA":28084, "GGATT":43701, "GGATC":35268, "GGATG":53603, "GGACA":35251, "GGACT":26488, "GGACC":32063, "GGACG":40034, "GGAGA":78142, "GGAGT":29914, "GGAGC":52090, "GGAGG":162473, "GGTAA":21821, "GGTAT":22778, "GGTAC":21200, "GGTAG":30135, "GGTTA":18416, "GGTTT":56971, "GGTTC":39170, "GGTTG":71472, "GGTCA":34018, "GGTCT":38060, "GGTCC":30911, "GGTCG":43673, "GGTGA":54430, "GGTGT":47956, "GGTGC":51915, "GGTGG":111443, "GGCAA":45914, "GGCAT":38884, "GGCAC":33724, "GGCAG":57464, "GGCTA":23167, "GGCTT":51802, "GGCTC":37024, "GGCTG":64207, "GGCCA":47959, "GGCCT":42590, "GGCCC":38403, "GGCCG":56254, "GGCGA":61521, "GGCGT":39617, "GGCGC":51387, "GGCGG":84657, "GGGAA":45864, "GGGAT":41936, "GGGAC":31428, "GGGAG":83643, "GGGTA":21477, "GGGTT":57716, "GGGTC":35881, "GGGTG":66584, "GGGCA":47656, "GGGCT":43351, "GGGCC":36376, "GGGCG":55314, "GGGGA":61696, "GGGGT":55216, "GGGGC":46850, "GGGGG":59662 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/b2/AM-AL-32B_S36_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/b2/AM-AL-32B_S36_R2_001.fastq.gz -o AM-AL-32B.trim.R1.fastq.gz -O AM-AL-32B.trim.R2.fastq.gz -m --merged_out AM-AL-32B.trim.merged.fastq.gz " }