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"GTGAG":47190, "GTGTA":22881, "GTGTT":49344, "GTGTC":32696, "GTGTG":35871, "GTGCA":38538, "GTGCT":50592, "GTGCC":47210, "GTGCG":38396, "GTGGA":70992, "GTGGT":67168, "GTGGC":65448, "GTGGG":72404, "GCAAA":84247, "GCAAT":53613, "GCAAC":72341, "GCAAG":83696, "GCATA":42586, "GCATT":51673, "GCATC":65847, "GCATG":48243, "GCACA":328298, "GCACT":35954, "GCACC":73855, "GCACG":45530, "GCAGA":124584, "GCAGT":44327, "GCAGC":83623, "GCAGG":104475, "GCTAA":30379, "GCTAT":45257, "GCTAC":40710, "GCTAG":38001, "GCTTA":37788, "GCTTT":86097, "GCTTC":114265, "GCTTG":82229, "GCTCA":63498, "GCTCT":61475, "GCTCC":82017, "GCTCG":61613, "GCTGA":81292, "GCTGT":58769, "GCTGC":82397, "GCTGG":114838, "GCCAA":106231, "GCCAT":73034, "GCCAC":80297, "GCCAG":104902, "GCCTA":50753, "GCCTT":84290, "GCCTC":98312, "GCCTG":88901, "GCCCA":97486, "GCCCT":76975, "GCCCC":81345, "GCCCG":70076, "GCCGA":94013, "GCCGT":67425, "GCCGC":105725, "GCCGG":86223, "GCGAA":74232, "GCGAT":60921, "GCGAC":62088, "GCGAG":67564, "GCGTA":29559, "GCGTT":49266, "GCGTC":51222, "GCGTG":43209, "GCGCA":55524, "GCGCT":55056, "GCGCC":78984, "GCGCG":61701, "GCGGA":76812, "GCGGT":62620, "GCGGC":96619, "GCGGG":76886, "GGAAA":104367, "GGAAT":65561, "GGAAC":74709, "GGAAG":506457, "GGATA":59197, "GGATT":67663, "GGATC":58000, "GGATG":78865, "GGACA":59566, "GGACT":42280, "GGACC":49513, "GGACG":55887, "GGAGA":170750, "GGAGT":46997, "GGAGC":74388, "GGAGG":132806, "GGTAA":33100, "GGTAT":34895, "GGTAC":27773, "GGTAG":57461, "GGTTA":39689, "GGTTT":92297, "GGTTC":77762, "GGTTG":95123, "GGTCA":58772, "GGTCT":69921, "GGTCC":44410, "GGTCG":58391, "GGTGA":79706, "GGTGT":51097, "GGTGC":57505, "GGTGG":100176, "GGCAA":89341, "GGCAT":65448, "GGCAC":51665, "GGCAG":99250, "GGCTA":50004, "GGCTT":95976, "GGCTC":68517, "GGCTG":103520, "GGCCA":80931, "GGCCT":69300, "GGCCC":60667, "GGCCG":80295, "GGCGA":104296, "GGCGT":61014, "GGCGC":75780, "GGCGG":119299, "GGGAA":76082, "GGGAT":62004, "GGGAC":47455, "GGGAG":96905, "GGGTA":36361, "GGGTT":83748, "GGGTC":54122, "GGGTG":69266, "GGGCA":74087, "GGGCT":72130, "GGGCC":55386, "GGGCG":75461, "GGGGA":79941, "GGGGT":67352, "GGGGC":66470, "GGGGG":213735 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 1302430, "total_bases": 79448230, "q20_bases": 77540165, "q30_bases": 74268328, "total_cycles": 61, "quality_curves": { "A":[39.2779,39.2054,39.191,39.0613,39.081,38.9812,39.0873,38.9354,39.0979,39.0771,39.1027,39.0757,39.1192,39.1124,39.0948,39.1017,39.1101,39.0962,39.1224,39.1018,38.2985,39.0542,39.1015,39.1095,38.3653,39.0522,39.0768,38.1818,38.8788,38.5286,39.0651,39.0694,39.0086,39.0294,38.9952,38.9906,39.0357,38.9929,38.932,38.3019,38.865,37.9089,38.7699,38.7492,38.6175,38.3615,37.7692,37.6763,38.2482,38.0362,37.8789,37.7105,37.5506,37.1705,37.1532,36.9625,36.7998,36.5873,36.4842,35.9727,35.8073], 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"CTTGA":68648, "CTTGT":63558, "CTTGC":62489, "CTTGG":74811, "CTCAA":66046, "CTCAT":51204, "CTCAC":43566, "CTCAG":53834, "CTCTA":36413, "CTCTT":82128, "CTCTC":64267, "CTCTG":57982, "CTCCA":91217, "CTCCT":126111, "CTCCC":86110, "CTCCG":67535, "CTCGA":59352, "CTCGT":46845, "CTCGC":55044, "CTCGG":54319, "CTGAA":69607, "CTGAT":51108, "CTGAC":43145, "CTGAG":50060, "CTGTA":23670, "CTGTT":64464, "CTGTC":43874, "CTGTG":42482, "CTGCA":64092, "CTGCT":88862, "CTGCC":80818, "CTGCG":52449, "CTGGA":79461, "CTGGT":67442, "CTGGC":74729, "CTGGG":71386, "CCAAA":101082, "CCAAT":54420, "CCAAC":98293, "CCAAG":81509, "CCATA":44456, "CCATT":55291, "CCATC":80651, "CCATG":57634, "CCACA":82905, "CCACT":45591, "CCACC":119397, "CCACG":55997, "CCAGA":81008, "CCAGT":53578, "CCAGC":109831, "CCAGG":71705, "CCTAA":30777, "CCTAT":39004, "CCTAC":44207, "CCTAG":29260, "CCTTA":32952, "CCTTT":80735, "CCTTC":108730, "CCTTG":75861, "CCTCA":77282, "CCTCT":77988, "CCTCC":134847, "CCTCG":72049, "CCTGA":66164, "CCTGT":57458, "CCTGC":100744, "CCTGG":72261, "CCCAA":97308, "CCCAT":61500, "CCCAC":88104, "CCCAG":81807, "CCCTA":40404, "CCCTT":64999, "CCCTC":79714, "CCCTG":68706, "CCCCA":94866, "CCCCT":69482, "CCCCC":67965, "CCCCG":68327, "CCCGA":56480, "CCCGT":39752, "CCCGC":77319, "CCCGG":58243, "CCGAA":62698, "CCGAT":49957, "CCGAC":55168, "CCGAG":55525, "CCGTA":28165, "CCGTT":43231, "CCGTC":56497, "CCGTG":41525, "CCGCA":62481, "CCGCT":60331, "CCGCC":118668, "CCGCG":52555, "CCGGA":55581, "CCGGT":46016, "CCGGC":75623, "CCGGG":53166, "CGAAA":66690, "CGAAT":39354, "CGAAC":50595, "CGAAG":70893, "CGATA":35257, "CGATT":48051, "CGATC":51564, "CGATG":62804, "CGACA":53180, "CGACT":41262, "CGACC":61244, "CGACG":57522, "CGAGA":57157, "CGAGT":30472, "CGAGC":49623, "CGAGG":62994, "CGTAA":24922, "CGTAT":22209, "CGTAC":19769, "CGTAG":30074, "CGTTA":19758, "CGTTT":46897, "CGTTC":46417, "CGTTG":46624, "CGTCA":47150, "CGTCT":48055, "CGTCC":48431, "CGTCG":52857, "CGTGA":35958, "CGTGT":24171, "CGTGC":34141, "CGTGG":46064, "CGCAA":49037, "CGCAT":36142, "CGCAC":39194, "CGCAG":51416, "CGCTA":24376, "CGCTT":56251, "CGCTC":49784, "CGCTG":58869, "CGCCA":81123, "CGCCT":82417, "CGCCC":77234, "CGCCG":91680, "CGCGA":42924, "CGCGT":29425, "CGCGC":51724, "CGCGG":49952, "CGGAA":56360, "CGGAT":42945, "CGGAC":33461, "CGGAG":59206, "CGGTA":26732, "CGGTT":49151, "CGGTC":47216, "CGGTG":52290, "CGGCA":61491, "CGGCT":66244, "CGGCC":69077, "CGGCG":85229, "CGGGA":48199, "CGGGT":41404, "CGGGC":51963, "CGGGG":54317, "GAAAA":112866, "GAAAT":67612, "GAAAC":74397, "GAAAG":80550, "GAATA":43459, "GAATT":48873, "GAATC":54349, "GAATG":46262, "GAACA":64401, "GAACT":53461, "GAACC":73986, "GAACG":46524, "GAAGA":114465, "GAAGT":52985, "GAAGC":89886, "GAAGG":89956, "GATAA":45454, "GATAT":39122, "GATAC":31448, "GATAG":42754, "GATTA":32554, "GATTT":63630, "GATTC":54652, "GATTG":54430, "GATCA":54564, "GATCT":53162, "GATCC":52091, "GATCG":46744, "GATGA":78306, "GATGT":46676, "GATGC":54284, "GATGG":70714, "GACAA":67090, "GACAT":44105, "GACAC":35545, "GACAG":43024, "GACTA":26203, "GACTT":48374, "GACTC":35047, "GACTG":38277, "GACCA":62652, "GACCT":51948, "GACCC":58867, "GACCG":49811, "GACGA":66292, "GACGT":32313, "GACGC":46727, "GACGG":49789, "GAGAA":100115, "GAGAT":61088, "GAGAC":59473, "GAGAG":53932, "GAGTA":23983, "GAGTT":44864, "GAGTC":29809, "GAGTG":26886, "GAGCA":58935, "GAGCT":45455, "GAGCC":56188, "GAGCG":42802, "GAGGA":108777, "GAGGT":54656, "GAGGC":73990, "GAGGG":57876, "GTAAA":27023, "GTAAT":21911, "GTAAC":22897, "GTAAG":20139, "GTATA":15778, "GTATT":29025, "GTATC":27653, "GTATG":25980, "GTACA":21429, "GTACT":20550, "GTACC":22974, "GTACG":19696, "GTAGA":37395, "GTAGT":23631, "GTAGC":29791, "GTAGG":31992, "GTTAA":24112, "GTTAT":29158, "GTTAC":25551, "GTTAG":19347, "GTTTA":27318, "GTTTT":77110, "GTTTC":67730, "GTTTG":66782, "GTTCA":54509, "GTTCT":63615, "GTTCC":64942, "GTTCG":46228, "GTTGA":64291, "GTTGT":56712, "GTTGC":53968, "GTTGG":73369, "GTCAA":52600, "GTCAT":40918, "GTCAC":34213, "GTCAG":37787, "GTCTA":26794, "GTCTT":60786, "GTCTC":56715, "GTCTG":46090, "GTCCA":46381, "GTCCT":47785, "GTCCC":41829, "GTCCG":32009, "GTCGA":47674, "GTCGT":41431, "GTCGC":47143, "GTCGG":44434, "GTGAA":51997, "GTGAT":42929, "GTGAC":31270, "GTGAG":34090, "GTGTA":17273, "GTGTT":41402, "GTGTC":27009, "GTGTG":29283, "GTGCA":30219, "GTGCT":41536, "GTGCC":38841, "GTGCG":31528, "GTGGA":55980, "GTGGT":56125, "GTGGC":54446, "GTGGG":59172, "GCAAA":66537, "GCAAT":43882, "GCAAC":59836, "GCAAG":57864, "GCATA":32350, "GCATT":42205, "GCATC":53735, "GCATG":39056, "GCACA":39223, "GCACT":29115, "GCACC":60467, "GCACG":36427, "GCAGA":66008, "GCAGT":36268, "GCAGC":68975, "GCAGG":85695, "GCTAA":23694, "GCTAT":36071, "GCTAC":33572, "GCTAG":21487, "GCTTA":28041, "GCTTT":72310, "GCTTC":96042, "GCTTG":68616, "GCTCA":50605, "GCTCT":50579, "GCTCC":68593, "GCTCG":49737, "GCTGA":64760, "GCTGT":48438, "GCTGC":68173, "GCTGG":95124, "GCCAA":82643, "GCCAT":60999, "GCCAC":66611, "GCCAG":72473, "GCCTA":38245, "GCCTT":70747, "GCCTC":83397, "GCCTG":73702, "GCCCA":77285, "GCCCT":63513, "GCCCC":68048, "GCCCG":56549, "GCCGA":72736, "GCCGT":55257, "GCCGC":85406, "GCCGG":68891, "GCGAA":56147, "GCGAT":49216, "GCGAC":50695, "GCGAG":47120, "GCGTA":21639, "GCGTT":40166, "GCGTC":40685, "GCGTG":33978, "GCGCA":41966, "GCGCT":44105, "GCGCC":64899, "GCGCG":49230, "GCGGA":58269, "GCGGT":50807, "GCGGC":78360, "GCGGG":61962, "GGAAA":83486, "GGAAT":54380, "GGAAC":61632, "GGAAG":82430, "GGATA":45973, "GGATT":57021, "GGATC":47400, "GGATG":64969, "GGACA":46464, "GGACT":34147, "GGACC":40309, "GGACG":44261, "GGAGA":102834, "GGAGT":37958, "GGAGC":60468, "GGAGG":108293, "GGTAA":25444, "GGTAT":28178, "GGTAC":22177, "GGTAG":37356, "GGTTA":30414, "GGTTT":78662, "GGTTC":65312, "GGTTG":79387, "GGTCA":46344, "GGTCT":57976, "GGTCC":36601, "GGTCG":47249, "GGTGA":61538, "GGTGT":42538, "GGTGC":47534, "GGTGG":83072, "GGCAA":69546, "GGCAT":53269, "GGCAC":41895, "GGCAG":68009, "GGCTA":37057, "GGCTT":79858, "GGCTC":56206, "GGCTG":85709, "GGCCA":62538, "GGCCT":57465, "GGCCC":49355, "GGCCG":63934, "GGCGA":81227, "GGCGT":48648, "GGCGC":60859, "GGCGG":96599, "GGGAA":58668, "GGGAT":50342, "GGGAC":38348, "GGGAG":68127, "GGGTA":26705, "GGGTT":70330, "GGGTC":44968, "GGGTG":56060, "GGGCA":57261, "GGGCT":59812, "GGGCC":45360, "GGGCG":60792, "GGGGA":59989, "GGGGT":54544, "GGGGC":54787, "GGGGG":45853 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/AM-AL-2B_S51_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/AM-AL-2B_S51_R2_001.fastq.gz -o AM-AL-2B.trim.R1.fastq.gz -O AM-AL-2B.trim.R2.fastq.gz -m --merged_out AM-AL-2B.trim.merged.fastq.gz " }