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"GAGAT":167204, "GAGAC":72359, "GAGAG":79710, "GAGTA":32241, "GAGTT":58114, "GAGTC":37411, "GAGTG":36819, "GAGCA":291770, "GAGCT":61119, "GAGCC":79144, "GAGCG":65656, "GAGGA":149370, "GAGGT":81415, "GAGGC":100434, "GAGGG":88430, "GTAAA":37017, "GTAAT":32219, "GTAAC":32823, "GTAAG":31060, "GTATA":22446, "GTATT":36598, "GTATC":35535, "GTATG":32092, "GTACA":28938, "GTACT":27932, "GTACC":33679, "GTACG":30067, "GTAGA":69475, "GTAGT":33360, "GTAGC":42711, "GTAGG":43260, "GTTAA":28751, "GTTAT":35953, "GTTAC":33809, "GTTAG":28572, "GTTTA":35596, "GTTTT":82701, "GTTTC":72453, "GTTTG":75427, "GTTCA":61963, "GTTCT":69795, "GTTCC":80046, "GTTCG":61701, "GTTGA":76580, "GTTGT":65793, "GTTGC":65825, "GTTGG":100134, "GTCAA":62069, "GTCAT":50042, "GTCAC":72514, "GTCAG":56611, "GTCTA":32602, "GTCTT":63436, "GTCTC":60872, "GTCTG":165900, "GTCCA":63673, "GTCCT":61953, "GTCCC":54309, "GTCCG":47004, "GTCGA":65909, "GTCGT":56387, "GTCGC":60103, "GTCGG":66203, "GTGAA":71146, "GTGAT":61074, "GTGAC":40803, 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"GCGTT":50141, "GCGTC":54183, "GCGTG":50621, "GCGCA":61359, "GCGCT":62035, "GCGCC":91816, "GCGCG":66883, "GCGGA":87234, "GCGGT":73399, "GCGGC":119644, "GCGGG":95619, "GGAAA":105056, "GGAAT":67005, "GGAAC":81065, "GGAAG":382732, "GGATA":64079, "GGATT":70317, "GGATC":65823, "GGATG":93911, "GGACA":65521, "GGACT":45790, "GGACC":58263, "GGACG":67495, "GGAGA":178291, "GGAGT":54867, "GGAGC":88716, "GGAGG":157005, "GGTAA":42156, "GGTAT":40980, "GGTAC":35398, "GGTAG":66107, "GGTTA":38786, "GGTTT":87596, "GGTTC":77777, "GGTTG":103866, "GGTCA":67663, "GGTCT":69670, "GGTCC":53007, "GGTCG":68464, "GGTGA":99637, "GGTGT":60188, "GGTGC":72575, "GGTGG":128523, "GGCAA":93677, "GGCAT":83774, "GGCAC":60441, "GGCAG":110945, "GGCTA":56513, "GGCTT":96304, "GGCTC":76763, "GGCTG":118215, "GGCCA":102059, "GGCCT":79212, "GGCCC":75339, "GGCCG":104119, "GGCGA":118706, "GGCGT":69824, "GGCGC":90456, "GGCGG":145660, "GGGAA":87697, "GGGAT":78638, "GGGAC":56335, "GGGAG":118553, "GGGTA":47044, "GGGTT":89397, 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"C":[0.345699,0.286094,0.348433,0.319444,0.312673,0.256258,0.269527,0.265149,0.266528,0.276468,0.28047,0.276696,0.282022,0.282573,0.280202,0.283313,0.28253,0.280757,0.284029,0.282232,0.282272,0.28509,0.284358,0.279289,0.284492,0.283378,0.279575,0.281552,0.281685,0.278453,0.281126,0.280434,0.279273,0.280238,0.279905,0.276522,0.278125,0.279987,0.273746,0.277635,0.277033,0.276075,0.277567,0.277677,0.275301,0.275861,0.275856,0.271247,0.275672,0.274956,0.27233,0.273935,0.272026,0.271132,0.269657,0.271741,0.271065,0.270731,0.270186,0.269544,0.269921,0.271008,0.270463,0.270679,0.268143,0.271315,0.27014,0.268134,0.27531,0.268276,0.268952,0.267657,0.27108,0.271521,0.27092,0.272225,0.267902,0.274115,0.271869,0.273575,0.274587,0.268863,0.275237,0.276751,0.279245,0.280685,0.288198,0.295187,0.302736,0.313037,0.354442], 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"GC":[0.628699,0.539596,0.617004,0.601017,0.591196,0.533315,0.528687,0.50996,0.512498,0.523081,0.527,0.529077,0.534402,0.535038,0.538251,0.541072,0.5389,0.538514,0.539145,0.536394,0.541011,0.540998,0.539629,0.539211,0.542053,0.541447,0.541535,0.540475,0.538422,0.538722,0.541324,0.537743,0.540762,0.540834,0.540187,0.538644,0.538836,0.537997,0.539241,0.537983,0.536874,0.5402,0.541153,0.539082,0.539897,0.537931,0.539644,0.536765,0.539478,0.538831,0.540383,0.54095,0.537039,0.540124,0.537879,0.537053,0.540568,0.537734,0.537132,0.543269,0.541235,0.54141,0.544757,0.541231,0.541737,0.545262,0.543041,0.542843,0.550287,0.543946,0.543465,0.548221,0.550769,0.547829,0.552006,0.552981,0.546267,0.561164,0.55849,0.554592,0.565677,0.563276,0.56882,0.577047,0.588207,0.593605,0.603198,0.619004,0.610659,0.616482,0.627265] }, "kmer_count": { "AAAAA":91205, "AAAAT":59373, "AAAAC":69757, "AAAAG":73110, "AAATA":40608, "AAATT":43251, "AAATC":52462, "AAATG":43406, "AAACA":57782, "AAACT":42148, "AAACC":78020, 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"CATCG":60018, "CATGA":41589, "CATGT":26901, "CATGC":36089, "CATGG":47994, "CACAA":52738, "CACAT":31619, "CACAC":42610, "CACAG":44152, "CACTA":19974, "CACTT":31836, "CACTC":30952, "CACTG":30774, "CACCA":103063, "CACCT":68275, "CACCC":91750, "CACCG":68582, "CACGA":43151, "CACGT":26263, "CACGC":42121, "CACGG":42791, "CAGAA":66296, "CAGAT":41416, "CAGAC":43685, "CAGAG":46382, "CAGTA":24758, "CAGTT":43371, "CAGTC":34786, "CAGTG":28058, "CAGCA":80793, "CAGCT":52100, "CAGCC":94043, "CAGCG":55012, "CAGGA":88720, "CAGGT":50681, "CAGGC":71094, "CAGGG":57672, "CTAAA":26810, "CTAAT":17154, "CTAAC":18771, "CTAAG":18251, "CTATA":17815, "CTATT":31506, "CTATC":36467, "CTATG":29891, "CTACA":29866, "CTACT":26707, "CTACC":49652, "CTACG":30117, "CTAGA":16294, "CTAGT":11745, "CTAGC":19360, "CTAGG":18665, "CTTAA":21806, "CTTAT":27748, "CTTAC":20011, "CTTAG":18900, "CTTTA":34567, "CTTTT":74487, "CTTTC":67806, "CTTTG":55496, "CTTCA":73592, "CTTCT":89352, "CTTCC":82092, "CTTCG":64848, "CTTGA":54992, "CTTGT":50933, "CTTGC":50141, "CTTGG":63305, "CTCAA":51395, "CTCAT":42595, "CTCAC":38304, "CTCAG":42089, "CTCTA":29094, "CTCTT":61075, "CTCTC":50514, "CTCTG":46352, "CTCCA":79947, "CTCCT":107500, "CTCCC":79161, "CTCCG":63665, "CTCGA":51522, "CTCGT":40066, "CTCGC":48847, "CTCGG":50887, "CTGAA":53295, "CTGAT":44221, "CTGAC":37434, "CTGAG":41756, "CTGTA":20540, "CTGTT":55795, "CTGTC":35965, "CTGTG":37347, "CTGCA":52257, "CTGCT":83323, "CTGCC":73916, "CTGCG":48167, "CTGGA":73716, "CTGGT":66275, "CTGGC":73691, "CTGGG":73070, "CCAAA":81132, "CCAAT":47737, "CCAAC":93307, "CCAAG":67683, "CCATA":37895, "CCATT":45335, "CCATC":73438, "CCATG":49819, "CCACA":73594, "CCACT":40504, "CCACC":129193, "CCACG":55343, "CCAGA":72210, "CCAGT":50141, "CCAGC":106182, "CCAGG":79384, "CCTAA":24470, "CCTAT":29238, "CCTAC":37733, "CCTAG":19835, "CCTTA":24943, "CCTTT":64465, "CCTTC":86829, "CCTTG":66503, "CCTCA":62588, "CCTCT":62261, "CCTCC":120897, "CCTCG":64609, "CCTGA":56013, "CCTGT":51472, "CCTGC":94740, "CCTGG":77946, "CCCAA":86526, "CCCAT":53613, "CCCAC":88661, "CCCAG":81364, "CCCTA":33974, "CCCTT":55351, "CCCTC":72015, "CCCTG":64011, "CCCCA":94545, "CCCCT":65998, "CCCCC":72484, "CCCCG":70118, "CCCGA":56415, "CCCGT":38997, "CCCGC":79470, "CCCGG":66044, "CCGAA":56775, "CCGAT":50010, "CCGAC":55992, "CCGAG":54134, "CCGTA":26264, "CCGTT":39444, "CCGTC":52233, "CCGTG":38769, "CCGCA":59970, "CCGCT":58110, "CCGCC":120559, "CCGCG":56512, "CCGGA":59351, "CCGGT":51755, "CCGGC":83472, "CCGGG":63317, "CGAAA":53615, "CGAAT":33026, "CGAAC":44571, "CGAAG":62941, "CGATA":33476, "CGATT":41755, "CGATC":50833, "CGATG":62304, "CGACA":44021, "CGACT":36082, "CGACC":61310, "CGACG":59237, "CGAGA":49967, "CGAGT":25742, "CGAGC":49179, "CGAGG":62387, "CGTAA":22958, "CGTAT":18478, "CGTAC":19623, "CGTAG":25991, "CGTTA":17210, "CGTTT":38029, "CGTTC":40605, "CGTTG":42055, "CGTCA":38848, "CGTCT":39093, "CGTCC":46441, "CGTCG":51706, "CGTGA":31938, "CGTGT":21566, "CGTGC":31760, "CGTGG":46524, "CGCAA":40916, "CGCAT":31453, "CGCAC":39204, "CGCAG":48792, "CGCTA":21967, "CGCTT":45889, "CGCTC":48102, "CGCTG":56235, "CGCCA":76230, "CGCCT":70914, "CGCCC":79084, "CGCCG":95151, "CGCGA":40238, "CGCGT":27274, "CGCGC":48186, "CGCGG":54318, "CGGAA":51688, "CGGAT":41706, "CGGAC":33790, "CGGAG":58553, "CGGTA":28585, "CGGTT":43453, "CGGTC":46166, "CGGTG":55719, "CGGCA":63894, "CGGCT":67458, "CGGCC":75354, "CGGCG":90981, "CGGGA":53656, "CGGGT":43681, "CGGGC":57198, "CGGGG":60923, "GAAAA":87173, "GAAAT":56195, "GAAAC":56948, "GAAAG":64933, "GAATA":34378, "GAATT":40441, "GAATC":42651, "GAATG":37723, "GAACA":53771, "GAACT":44824, "GAACC":58978, "GAACG":40196, "GAAGA":94059, "GAAGT":44885, "GAAGC":76379, "GAAGG":82205, "GATAA":41056, "GATAT":36008, "GATAC":28651, "GATAG":36476, "GATTA":28691, "GATTT":53834, "GATTC":44439, "GATTG":45578, "GATCA":50197, "GATCT":44927, "GATCC":49437, "GATCG":47316, "GATGA":73044, "GATGT":42247, "GATGC":49341, "GATGG":69289, "GACAA":50602, "GACAT":35914, "GACAC":30851, "GACAG":37107, "GACTA":21455, "GACTT":39793, "GACTC":27633, "GACTG":32234, "GACCA":58398, "GACCT":45720, "GACCC":55617, "GACCG":49984, "GACGA":61666, "GACGT":28522, "GACGC":43131, "GACGG":51169, "GAGAA":81270, "GAGAT":55738, "GAGAC":49552, "GAGAG":49034, "GAGTA":21009, "GAGTT":39451, "GAGTC":25027, "GAGTG":25280, "GAGCA":56886, "GAGCT":39649, "GAGCC":53917, "GAGCG":43735, "GAGGA":100394, "GAGGT":53503, "GAGGC":66813, "GAGGG":59936, "GTAAA":25283, "GTAAT":21759, "GTAAC":21847, "GTAAG":17951, "GTATA":14986, "GTATT":25681, "GTATC":24616, "GTATG":22354, "GTACA":19058, "GTACT":19348, "GTACC":23310, "GTACG":19864, "GTAGA":31723, "GTAGT":23292, "GTAGC":29054, "GTAGG":29637, "GTTAA":19309, "GTTAT":25479, "GTTAC":24334, "GTTAG":17183, "GTTTA":24310, "GTTTT":61611, "GTTTC":52613, "GTTTG":56999, "GTTCA":42052, "GTTCT":49944, "GTTCC":58458, "GTTCG":44192, "GTTGA":52966, "GTTGT":49208, "GTTGC":47253, "GTTGG":76187, "GTCAA":40785, "GTCAT":35104, "GTCAC":30024, "GTCAG":34192, "GTCTA":20898, "GTCTT":45193, "GTCTC":44953, "GTCTG":39957, "GTCCA":43337, "GTCCT":44470, "GTCCC":39265, "GTCCG":32406, "GTCGA":43900, "GTCGT":38276, "GTCGC":41716, "GTCGG":45905, "GTGAA":45308, "GTGAT":41268, "GTGAC":28187, "GTGAG":32280, "GTGTA":15742, "GTGTT":37342, "GTGTC":23718, "GTGTG":30445, "GTGCA":28320, "GTGCT":38947, "GTGCC":39546, "GTGCG":32754, "GTGGA":53379, "GTGGT":61546, "GTGGC":55605, "GTGGG":64092, "GCAAA":52543, "GCAAT":38016, "GCAAC":50910, "GCAAG":50044, "GCATA":26747, "GCATT":37213, "GCATC":48231, "GCATG":34081, "GCACA":35180, "GCACT":25721, "GCACC":62988, "GCACG":34501, "GCAGA":55322, "GCAGT":33126, "GCAGC":69391, "GCAGG":85436, "GCTAA":20241, "GCTAT":32237, "GCTAC":33643, "GCTAG":18024, "GCTTA":23737, "GCTTT":57435, "GCTTC":75998, "GCTTG":57327, "GCTCA":45946, "GCTCT":42283, "GCTCC":65579, "GCTCG":48586, "GCTGA":55909, "GCTGT":44908, "GCTGC":67890, "GCTGG":94440, "GCCAA":73540, "GCCAT":54147, "GCCAC":64351, "GCCAG":73184, "GCCTA":29354, "GCCTT":57735, "GCCTC":69340, "GCCTG":69725, "GCCCA":73449, "GCCCT":57605, "GCCCC":67537, "GCCCG":60572, "GCCGA":73205, "GCCGT":53509, "GCCGC":89317, "GCCGG":78398, "GCGAA":47081, "GCGAT":47841, "GCGAC":46715, "GCGAG":45145, "GCGTA":19920, "GCGTT":34848, "GCGTC":36882, "GCGTG":34613, "GCGCA":40633, "GCGCT":42547, "GCGCC":64651, "GCGCG":45614, "GCGGA":56770, "GCGGT":52167, "GCGGC":83602, "GCGGG":67078, "GGAAA":69838, "GGAAT":46141, "GGAAC":56882, "GGAAG":75013, "GGATA":41391, "GGATT":49932, "GGATC":46333, "GGATG":63885, "GGACA":42789, "GGACT":31057, "GGACC":41431, "GGACG":44867, "GGAGA":94544, "GGAGT":36879, "GGAGC":61211, "GGAGG":107951, "GGTAA":26144, "GGTAT":27901, "GGTAC":23992, "GGTAG":38390, "GGTTA":25698, "GGTTT":65246, "GGTTC":55392, "GGTTG":78117, "GGTCA":44915, "GGTCT":50224, "GGTCC":37172, "GGTCG":47752, "GGTGA":63895, "GGTGT":44693, "GGTGC":52318, "GGTGG":95196, "GGCAA":61887, "GGCAT":50290, "GGCAC":42252, "GGCAG":67026, "GGCTA":36752, "GGCTT":67318, "GGCTC":53450, "GGCTG":83275, "GGCCA":66924, "GGCCT":55185, "GGCCC":51775, "GGCCG":70080, "GGCGA":77706, "GGCGT":47560, "GGCGC":61972, "GGCGG":102953, "GGGAA":56868, "GGGAT":53466, "GGGAC":37671, "GGGAG":70701, "GGGTA":29661, "GGGTT":66076, "GGGTC":45645, "GGGTG":65133, "GGGCA":56924, "GGGCT":57727, "GGGCC":49973, "GGGCG":65602, "GGGGA":65253, "GGGGT":61279, "GGGGC":58575, "GGGGG":54258 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/b2/AM-AL-27A_S19_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/b2/AM-AL-27A_S19_R2_001.fastq.gz -o AM-AL-27A.trim.R1.fastq.gz -O AM-AL-27A.trim.R2.fastq.gz -m --merged_out AM-AL-27A.trim.merged.fastq.gz " }