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"GCGTC":45821, "GCGTG":42513, "GCGCA":53973, "GCGCT":53269, "GCGCC":78407, "GCGCG":55546, "GCGGA":71105, "GCGGT":69510, "GCGGC":95159, "GCGGG":72499, "GGAAA":99049, "GGAAT":66597, "GGAAC":74021, "GGAAG":687720, "GGATA":51736, "GGATT":72568, "GGATC":61405, "GGATG":75188, "GGACA":51130, "GGACT":37146, "GGACC":46827, "GGACG":47736, "GGAGA":167999, "GGAGT":40984, "GGAGC":69149, "GGAGG":113195, "GGTAA":29702, "GGTAT":33961, "GGTAC":24243, "GGTAG":58483, "GGTTA":37403, "GGTTT":98832, "GGTTC":76118, "GGTTG":109898, "GGTCA":56775, "GGTCT":67432, "GGTCC":45948, "GGTCG":63049, "GGTGA":73790, "GGTGT":55369, "GGTGC":61615, "GGTGG":117423, "GGCAA":82225, "GGCAT":59596, "GGCAC":48250, "GGCAG":103813, "GGCTA":43557, "GGCTT":94919, "GGCTC":65898, "GGCTG":100084, "GGCCA":77996, "GGCCT":62909, "GGCCC":53827, "GGCCG":76603, "GGCGA":99903, "GGCGT":56631, "GGCGC":74566, "GGCGG":118854, "GGGAA":70231, "GGGAT":59619, "GGGAC":38900, "GGGAG":82189, "GGGTA":32231, "GGGTT":88644, "GGGTC":53276, "GGGTG":68211, "GGGCA":68565, "GGGCT":68513, "GGGCC":49698, "GGGCG":71219, "GGGGA":68912, "GGGGT":64602, "GGGGC":61709, "GGGGG":100269 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 1294165, "total_bases": 78944065, "q20_bases": 76835715, "q30_bases": 73514322, "total_cycles": 61, "quality_curves": { "A":[39.3636,39.2576,39.1996,38.9198,38.9606,38.9494,39.081,38.9317,39.119,39.1012,39.1206,39.1018,39.1486,39.1376,39.1389,39.1262,39.1299,39.1174,39.1466,39.1367,38.8559,39.1272,39.1317,39.1505,38.8695,39.1136,39.1325,38.8534,39.0531,38.9324,39.1049,39.1352,39.079,39.11,38.8344,39.075,39.0938,39.0565,39.0297,38.9728,38.9359,38.6011,38.7768,38.6827,38.4787,38.2805,37.9329,37.7271,37.7683,37.4821,37.1988,36.9002,36.6716,36.2568,36.0561,35.7025,35.4597,35.1625,34.8896,34.3678,33.9585], 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"CCTGC":110431, "CCTGG":75653, "CCCAA":98736, "CCCAT":61510, "CCCAC":90071, "CCCAG":84466, "CCCTA":32258, "CCCTT":57695, "CCCTC":70498, "CCCTG":63967, "CCCCA":92500, "CCCCT":61916, "CCCCC":64678, "CCCCG":67009, "CCCGA":61147, "CCCGT":39752, "CCCGC":78917, "CCCGG":65122, "CCGAA":70011, "CCGAT":57463, "CCGAC":58384, "CCGAG":62249, "CCGTA":28283, "CCGTT":47310, "CCGTC":56866, "CCGTG":41937, "CCGCA":65010, "CCGCT":62051, "CCGCC":126591, "CCGCG":61013, "CCGGA":60984, "CCGGT":57602, "CCGGC":88704, "CCGGG":60936, "CGAAA":69505, "CGAAT":46385, "CGAAC":55671, "CGAAG":74709, "CGATA":34808, "CGATT":54058, "CGATC":62816, "CGATG":71326, "CGACA":50400, "CGACT":42013, "CGACC":67724, "CGACG":61198, "CGAGA":62558, "CGAGT":34007, "CGAGC":57435, "CGAGG":65820, "CGTAA":25085, "CGTAT":23601, "CGTAC":19091, "CGTAG":29384, "CGTTA":17962, "CGTTT":49435, "CGTTC":49956, "CGTTG":51503, "CGTCA":45105, "CGTCT":48125, "CGTCC":46626, "CGTCG":58759, "CGTGA":39118, "CGTGT":25466, "CGTGC":34236, "CGTGG":52782, "CGCAA":50619, "CGCAT":38546, "CGCAC":40291, "CGCAG":54311, "CGCTA":22263, "CGCTT":55677, "CGCTC":53176, "CGCTG":63633, "CGCCA":84267, "CGCCT":85017, "CGCCC":78209, "CGCCG":101690, "CGCGA":50609, "CGCGT":32992, "CGCGC":53798, "CGCGG":58812, "CGGAA":60098, "CGGAT":50484, "CGGAC":35090, "CGGAG":61165, "CGGTA":28347, "CGGTT":60888, "CGGTC":55212, "CGGTG":64949, "CGGCA":70049, "CGGCT":73798, "CGGCC":74592, "CGGCG":95692, "CGGGA":52999, "CGGGT":49304, "CGGGC":55721, "CGGGG":57397, "GAAAA":116472, "GAAAT":71937, "GAAAC":76563, "GAAAG":78053, "GAATA":43399, "GAATT":55216, "GAATC":59800, "GAATG":53367, "GAACA":66900, "GAACT":53952, "GAACC":76636, "GAACG":49681, "GAAGA":115570, "GAAGT":53699, "GAAGC":94066, "GAAGG":83912, "GATAA":42079, "GATAT":42660, "GATAC":29865, "GATAG":36519, "GATTA":34129, "GATTT":75881, "GATTC":62258, "GATTG":59893, "GATCA":64159, "GATCT":62434, "GATCC":59535, "GATCG":58602, "GATGA":88190, "GATGT":50194, "GATGC":57462, "GATGG":77298, "GACAA":62016, "GACAT":42667, "GACAC":33730, "GACAG":40295, "GACTA":22577, "GACTT":50714, "GACTC":34551, "GACTG":37821, "GACCA":66662, "GACCT":52148, "GACCC":58939, "GACCG":55520, "GACGA":68248, "GACGT":31634, "GACGC":45091, "GACGG":51975, "GAGAA":102071, "GAGAT":63655, "GAGAC":57487, "GAGAG":56001, "GAGTA":22287, "GAGTT":47224, "GAGTC":32489, "GAGTG":28386, "GAGCA":65339, "GAGCT":47072, "GAGCC":60699, "GAGCG":45968, "GAGGA":110473, "GAGGT":54299, "GAGGC":69684, "GAGGG":54546, "GTAAA":25690, "GTAAT":24026, "GTAAC":22504, "GTAAG":18401, "GTATA":14671, "GTATT":32183, "GTATC":28582, "GTATG":26842, "GTACA":19997, "GTACT":19657, "GTACC":22896, "GTACG":19323, "GTAGA":32231, "GTAGT":23834, "GTAGC":29476, "GTAGG":30509, "GTTAA":19035, "GTTAT":28191, "GTTAC":24893, "GTTAG":19909, "GTTTA":26067, "GTTTT":85799, "GTTTC":73104, "GTTTG":76461, "GTTCA":53039, "GTTCT":65727, "GTTCC":71974, "GTTCG":53084, "GTTGA":67903, "GTTGT":65921, "GTTGC":60708, "GTTGG":89637, "GTCAA":50116, "GTCAT":43095, "GTCAC":32900, "GTCAG":38098, "GTCTA":23584, "GTCTT":62128, "GTCTC":59921, "GTCTG":48599, "GTCCA":46547, "GTCCT":50131, "GTCCC":40078, "GTCCG":34379, "GTCGA":53121, "GTCGT":46194, "GTCGC":50985, "GTCGG":51782, "GTGAA":50757, "GTGAT":48148, "GTGAC":31645, "GTGAG":36359, "GTGTA":16347, "GTGTT":45578, "GTGTC":28898, "GTGTG":36985, "GTGCA":32529, "GTGCT":45513, "GTGCC":44285, "GTGCG":35053, "GTGGA":59940, "GTGGT":78619, "GTGGC":65744, "GTGGG":66333, "GCAAA":64397, "GCAAT":47327, "GCAAC":63435, "GCAAG":57835, "GCATA":30415, "GCATT":45298, "GCATC":56373, "GCATG":42415, "GCACA":40738, "GCACT":27640, "GCACC":66720, "GCACG":35036, "GCAGA":66445, "GCAGT":37165, "GCAGC":80182, "GCAGG":92693, "GCTAA":21134, "GCTAT":32084, "GCTAC":30630, "GCTAG":20765, "GCTTA":26644, "GCTTT":74307, "GCTTC":100674, "GCTTG":72965, "GCTCA":53008, "GCTCT":51218, "GCTCC":74550, "GCTCG":58232, "GCTGA":68216, "GCTGT":51070, "GCTGC":81607, "GCTGG":104497, "GCCAA":85898, "GCCAT":62891, "GCCAC":73984, "GCCAG":76552, "GCCTA":35113, "GCCTT":73080, "GCCTC":78583, "GCCTG":78018, "GCCCA":78580, "GCCCT":60161, "GCCCC":67544, "GCCCG":59933, "GCCGA":80261, "GCCGT":57932, "GCCGC":94286, "GCCGG":83314, "GCGAA":60770, "GCGAT":56612, "GCGAC":52061, "GCGAG":52080, "GCGTA":21467, "GCGTT":42978, "GCGTC":42108, "GCGTG":38564, "GCGCA":45103, "GCGCT":48997, "GCGCC":72328, "GCGCG":50378, "GCGGA":60159, "GCGGT":64462, "GCGGC":87477, "GCGGG":66094, "GGAAA":88155, "GGAAT":62476, "GGAAC":68950, "GGAAG":80496, "GGATA":42011, "GGATT":68778, "GGATC":56755, "GGATG":69907, "GGACA":43614, "GGACT":34676, "GGACC":43735, "GGACG":43301, "GGAGA":99833, "GGAGT":38098, "GGAGC":63741, "GGAGG":102967, "GGTAA":25846, "GGTAT":31698, "GGTAC":22455, "GGTAG":33878, "GGTTA":29607, "GGTTT":91875, "GGTTC":70825, "GGTTG":102007, "GGTCA":49013, "GGTCT":62677, "GGTCC":42783, "GGTCG":57660, "GGTGA":64285, "GGTGT":51359, "GGTGC":56966, "GGTGG":107939, "GGCAA":72191, "GGCAT":55722, "GGCAC":44380, "GGCAG":72725, "GGCTA":34310, "GGCTT":88273, "GGCTC":61258, "GGCTG":92507, "GGCCA":65436, "GGCCT":58419, "GGCCC":49254, "GGCCG":69612, "GGCGA":86808, "GGCGT":52151, "GGCGC":68207, "GGCGG":108464, "GGGAA":61781, "GGGAT":55828, "GGGAC":35977, "GGGAG":61752, "GGGTA":25029, "GGGTT":82654, "GGGTC":49439, "GGGTG":62163, "GGGCA":57778, "GGGCT":63809, "GGGCC":45585, "GGGCG":65041, "GGGGA":59420, "GGGGT":59163, "GGGGC":56678, "GGGGG":47154 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/AM-AL-17B_S97_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/AM-AL-17B_S97_R2_001.fastq.gz -o AM-AL-17B.trim.R1.fastq.gz -O AM-AL-17B.trim.R2.fastq.gz -m --merged_out AM-AL-17B.trim.merged.fastq.gz " }