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"GAGAG":57062, "GAGTA":25108, "GAGTT":45467, "GAGTC":28874, "GAGTG":27192, "GAGCA":475844, "GAGCT":46251, "GAGCC":55049, "GAGCG":47885, "GAGGA":104454, "GAGGT":56184, "GAGGC":68815, "GAGGG":57023, "GTAAA":28903, "GTAAT":24111, "GTAAC":24631, "GTAAG":24451, "GTATA":16941, "GTATT":32510, "GTATC":29037, "GTATG":26133, "GTACA":23387, "GTACT":20604, "GTACC":25116, "GTACG":20973, "GTAGA":82883, "GTAGT":24250, "GTAGC":32369, "GTAGG":32824, "GTTAA":23348, "GTTAT":30469, "GTTAC":27189, "GTTAG":31438, "GTTTA":32958, "GTTTT":86877, "GTTTC":68211, "GTTTG":72192, "GTTCA":53083, "GTTCT":61678, "GTTCC":68520, "GTTCG":49841, "GTTGA":64481, "GTTGT":61354, "GTTGC":58714, "GTTGG":86874, "GTCAA":50617, "GTCAT":42095, "GTCAC":98537, "GTCAG":48704, "GTCTA":27513, "GTCTT":59471, "GTCTC":51449, "GTCTG":290833, "GTCCA":49427, "GTCCT":48135, "GTCCC":39784, "GTCCG":35405, "GTCGA":54321, "GTCGT":46798, "GTCGC":51362, "GTCGG":54343, "GTGAA":55448, "GTGAT":50865, "GTGAC":33301, "GTGAG":41833, "GTGTA":21175, "GTGTT":46217, "GTGTC":28296, "GTGTG":34208, "GTGCA":36448, "GTGCT":47945, "GTGCC":46445, "GTGCG":38839, "GTGGA":60691, "GTGGT":72062, "GTGGC":65303, "GTGGG":67845, "GCAAA":68268, "GCAAT":46711, "GCAAC":59792, "GCAAG":71685, "GCATA":33918, "GCATT":43478, "GCATC":57447, "GCATG":44532, "GCACA":411066, "GCACT":29869, "GCACC":71193, "GCACG":40951, "GCAGA":118922, "GCAGT":37496, "GCAGC":83249, "GCAGG":94439, "GCTAA":26081, "GCTAT":35405, "GCTAC":34893, "GCTAG":34697, "GCTTA":34277, "GCTTT":74215, "GCTTC":94117, "GCTTG":71489, "GCTCA":52943, "GCTCT":48235, "GCTCC":70553, "GCTCG":56603, "GCTGA":70084, "GCTGT":54181, "GCTGC":84319, "GCTGG":112476, "GCCAA":87126, "GCCAT":66401, "GCCAC":71504, "GCCAG":107327, "GCCTA":38543, "GCCTT":72710, "GCCTC":73632, "GCCTG":82677, "GCCCA":84352, "GCCCT":61877, "GCCCC":70419, "GCCCG":67782, "GCCGA":88869, "GCCGT":64886, "GCCGC":109071, "GCCGG":92211, "GCGAA":61043, "GCGAT":56137, "GCGAC":52576, "GCGAG":59163, "GCGTA":26709, "GCGTT":44027, "GCGTC":43904, "GCGTG":42681, "GCGCA":58221, "GCGCT":56440, "GCGCC":83609, "GCGCG":63924, "GCGGA":65763, "GCGGT":64603, "GCGGC":101675, "GCGGG":72692, "GGAAA":86467, "GGAAT":55281, "GGAAC":62372, "GGAAG":586415, "GGATA":48680, "GGATT":61525, "GGATC":61522, "GGATG":69830, "GGACA":48119, "GGACT":33263, "GGACC":40879, "GGACG":46546, "GGAGA":141879, "GGAGT":38064, "GGAGC":62596, "GGAGG":105157, "GGTAA":30425, "GGTAT":32131, "GGTAC":25359, "GGTAG":57718, "GGTTA":33771, "GGTTT":89446, "GGTTC":63823, "GGTTG":91390, "GGTCA":53337, "GGTCT":57514, "GGTCC":40547, "GGTCG":56179, "GGTGA":75678, "GGTGT":50719, "GGTGC":61344, "GGTGG":106271, "GGCAA":76098, "GGCAT":57853, "GGCAC":47583, "GGCAG":94681, "GGCTA":44687, "GGCTT":84625, "GGCTC":56860, "GGCTG":95110, "GGCCA":80618, "GGCCT":62301, "GGCCC":55654, "GGCCG":83895, "GGCGA":91968, "GGCGT":58372, "GGCGC":82729, "GGCGG":118362, "GGGAA":63191, "GGGAT":53238, "GGGAC":37706, "GGGAG":79186, "GGGTA":32641, "GGGTT":79110, "GGGTC":47972, "GGGTG":68025, "GGGCA":66219, "GGGCT":62821, "GGGCC":51678, "GGGCG":74751, "GGGGA":64860, "GGGGT":65054, "GGGGC":59984, "GGGGG":151128 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 1169387, "total_bases": 71332607, "q20_bases": 69353264, "q30_bases": 66249674, "total_cycles": 61, "quality_curves": { "A":[39.3794,39.2299,39.1063,38.8514,38.8738,39.1005,39.0478,38.8891,39.1044,39.0896,39.083,39.0415,39.095,39.1013,39.1022,39.1021,39.1164,39.0926,39.1073,39.1036,38.5139,39.0783,39.1053,39.1343,38.5586,39.1049,39.1188,38.4624,39.0096,38.6318,39.0707,39.078,39.0349,39.0487,38.9945,39.0188,38.6357,38.983,38.9516,38.7831,38.8031,38.7228,38.6323,38.5281,38.373,38.0775,37.7215,37.4291,37.7419,37.4368,37.177,36.9593,36.7453,36.3151,36.2032,35.8708,35.6427,35.3992,35.193,34.6733,34.5362], 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"CCTGG":61391, "CCCAA":75929, "CCCAT":47665, "CCCAC":67103, "CCCAG":63114, "CCCTA":24604, "CCCTT":47756, "CCCTC":57017, "CCCTG":50861, "CCCCA":74728, "CCCCT":50359, "CCCCC":54349, "CCCCG":53473, "CCCGA":44454, "CCCGT":31787, "CCCGC":63747, "CCCGG":51145, "CCGAA":48924, "CCGAT":43143, "CCGAC":43583, "CCGAG":42672, "CCGTA":21541, "CCGTT":36919, "CCGTC":43737, "CCGTG":33294, "CCGCA":49885, "CCGCT":51442, "CCGCC":102145, "CCGCG":45021, "CCGGA":46128, "CCGGT":44995, "CCGGC":69625, "CCGGG":47477, "CGAAA":49130, "CGAAT":31790, "CGAAC":38384, "CGAAG":51597, "CGATA":28617, "CGATT":39395, "CGATC":42464, "CGATG":52459, "CGACA":36237, "CGACT":31893, "CGACC":47933, "CGACG":46054, "CGAGA":40333, "CGAGT":24955, "CGAGC":38887, "CGAGG":47531, "CGTAA":19685, "CGTAT":18301, "CGTAC":14766, "CGTAG":20871, "CGTTA":15293, "CGTTT":38269, "CGTTC":36464, "CGTTG":37952, "CGTCA":33838, "CGTCT":36067, "CGTCC":36226, "CGTCG":43635, "CGTGA":28450, "CGTGT":19729, "CGTGC":26996, "CGTGG":38540, "CGCAA":37052, "CGCAT":28937, "CGCAC":31977, "CGCAG":41007, "CGCTA":17674, "CGCTT":46659, "CGCTC":40465, "CGCTG":50832, "CGCCA":66048, "CGCCT":64107, "CGCCC":63286, "CGCCG":81108, "CGCGA":34085, "CGCGT":22833, "CGCGC":44001, "CGCGG":44246, "CGGAA":44306, "CGGAT":35676, "CGGAC":25326, "CGGAG":44593, "CGGTA":23086, "CGGTT":44330, "CGGTC":39576, "CGGTG":49645, "CGGCA":53242, "CGGCT":58548, "CGGCC":60960, "CGGCG":75809, "CGGGA":40025, "CGGGT":37132, "CGGGC":44580, "CGGGG":45269, "GAAAA":88961, "GAAAT":53934, "GAAAC":53867, "GAAAG":56995, "GAATA":33539, "GAATT":41561, "GAATC":40461, "GAATG":35444, "GAACA":47285, "GAACT":39342, "GAACC":52489, "GAACG":34152, "GAAGA":80608, "GAAGT":40485, "GAAGC":65682, "GAAGG":64326, "GATAA":35878, "GATAT":32351, "GATAC":23460, "GATAG":28070, "GATTA":26253, "GATTT":57791, "GATTC":43778, "GATTG":43653, "GATCA":43882, "GATCT":41957, "GATCC":41424, "GATCG":38548, "GATGA":62469, "GATGT":38134, "GATGC":44039, "GATGG":59531, "GACAA":45078, "GACAT":31687, "GACAC":24184, "GACAG":30105, "GACTA":18366, "GACTT":38298, "GACTC":24645, "GACTG":27598, "GACCA":47654, "GACCT":38301, "GACCC":41978, "GACCG":39085, "GACGA":49079, "GACGT":23893, "GACGC":34554, "GACGG":39556, "GAGAA":69502, "GAGAT":44629, "GAGAC":40641, "GAGAG":37296, "GAGTA":17171, "GAGTT":35744, "GAGTC":22371, "GAGTG":20908, "GAGCA":45403, "GAGCT":33446, "GAGCC":41573, "GAGCG":33519, "GAGGA":78590, "GAGGT":42456, "GAGGC":51886, "GAGGG":42344, "GTAAA":22001, "GTAAT":18817, "GTAAC":18042, "GTAAG":14719, "GTATA":12326, "GTATT":25638, "GTATC":22179, "GTATG":20007, "GTACA":15968, "GTACT":15222, "GTACC":18769, "GTACG":14836, "GTAGA":24992, "GTAGT":18068, "GTAGC":23202, "GTAGG":23640, "GTTAA":17962, "GTTAT":24749, "GTTAC":21368, "GTTAG":14796, "GTTTA":23637, "GTTTT":72439, "GTTTC":55199, "GTTTG":59447, "GTTCA":40036, "GTTCT":50285, "GTTCC":54780, "GTTCG":38011, "GTTGA":49208, "GTTGT":49886, "GTTGC":45689, "GTTGG":70251, "GTCAA":36914, "GTCAT":32649, "GTCAC":25549, "GTCAG":28864, "GTCTA":18751, "GTCTT":47874, "GTCTC":42994, "GTCTG":35269, "GTCCA":35756, "GTCCT":37722, "GTCCC":31077, "GTCCG":26037, "GTCGA":37612, "GTCGT":34571, "GTCGC":37263, "GTCGG":39049, "GTGAA":38256, "GTGAT":37840, "GTGAC":23796, "GTGAG":27159, "GTGTA":13926, "GTGTT":36619, "GTGTC":21349, "GTGTG":25955, "GTGCA":25303, "GTGCT":35348, "GTGCC":33992, "GTGCG":27225, "GTGGA":43190, "GTGGT":57195, "GTGGC":48858, "GTGGG":51867, "GCAAA":49186, "GCAAT":35793, "GCAAC":45259, "GCAAG":43145, "GCATA":22956, "GCATT":34017, "GCATC":42254, "GCATG":31815, "GCACA":28483, "GCACT":22071, "GCACC":53201, "GCACG":27799, "GCAGA":47850, "GCAGT":28155, "GCAGC":59817, "GCAGG":68309, "GCTAA":18380, "GCTAT":27039, "GCTAC":25519, "GCTAG":14991, "GCTTA":21914, "GCTTT":60117, "GCTTC":75480, "GCTTG":55318, "GCTCA":38133, "GCTCT":37707, "GCTCC":56395, "GCTCG":41973, "GCTGA":49857, "GCTGT":40593, "GCTGC":62929, "GCTGG":83256, "GCCAA":62804, "GCCAT":49055, "GCCAC":53071, "GCCAG":59353, "GCCTA":26234, "GCCTT":56719, "GCCTC":58768, "GCCTG":61465, "GCCCA":59390, "GCCCT":46908, "GCCCC":53635, "GCCCG":48068, "GCCGA":59865, "GCCGT":46697, "GCCGC":77277, "GCCGG":65054, "GCGAA":41871, "GCGAT":41345, "GCGAC":37220, "GCGAG":36195, "GCGTA":16547, "GCGTT":32785, "GCGTC":31308, "GCGTG":29234, "GCGCA":35925, "GCGCT":39356, "GCGCC":57274, "GCGCG":41194, "GCGGA":45129, "GCGGT":48454, "GCGGC":71192, "GCGGG":52775, "GGAAA":64999, "GGAAT":44050, "GGAAC":47940, "GGAAG":60339, "GGATA":33821, "GGATT":49414, "GGATC":37962, "GGATG":53154, "GGACA":33523, "GGACT":25035, "GGACC":30346, "GGACG":33014, "GGAGA":72135, "GGAGT":28820, "GGAGC":46386, "GGAGG":79665, "GGTAA":21609, "GGTAT":24696, "GGTAC":18383, "GGTAG":27909, "GGTTA":23145, "GGTTT":74150, "GGTTC":51643, "GGTTG":74162, "GGTCA":37213, "GGTCT":45992, "GGTCC":30709, "GGTCG":40964, "GGTGA":52265, "GGTGT":39399, "GGTGC":45312, "GGTGG":82817, "GGCAA":53400, "GGCAT":43341, "GGCAC":33988, "GGCAG":53663, "GGCTA":29413, "GGCTT":66105, "GGCTC":44148, "GGCTG":72003, "GGCCA":52120, "GGCCT":46690, "GGCCC":40335, "GGCCG":56653, "GGCGA":62656, "GGCGT":41559, "GGCGC":54375, "GGCGG":86556, "GGGAA":45739, "GGGAT":41358, "GGGAC":27882, "GGGAG":49425, "GGGTA":20953, "GGGTT":64421, "GGGTC":37137, "GGGTG":50370, "GGGCA":44746, "GGGCT":48533, "GGGCC":37087, "GGGCG":51870, "GGGGA":46186, "GGGGT":49788, "GGGGC":44882, "GGGGG":38823 }, "overrepresented_sequences": { } }, "command": "/redser4/software/fastp -l 30 -q 25 -y -Y 30 --detect_adapter_for_pe -i /scratch3/cwanket/andy-lake/raw/AM-AL-14B_S88_R1_001.fastq.gz -I /scratch3/cwanket/andy-lake/raw/AM-AL-14B_S88_R2_001.fastq.gz -o AM-AL-14B.trim.R1.fastq.gz -O AM-AL-14B.trim.R2.fastq.gz -m --merged_out AM-AL-14B.trim.merged.fastq.gz " }